RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SLC2A12Q8TD20 617 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF675Q8TD23 568 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 C10orf82Q8WW14 230 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 PSMF1Q92530 271 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 TTC9Q92623 222 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 CIDECQ96AQ7 238 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 SENP5Q96HI0 755 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 FBXL20Q96IG2 436 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 AMDHD1Q96NU7 426 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 BBS4Q96RK4 519 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 BHLHE41Q9C0J9 482 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF385DQ9H6B1 395 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ACSS1Q9NUB1 689 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ATAD3AQ9NVI7 634 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 MAT2BQ9NZL9 334 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF223Q9UK11 482 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
TCOF1-210ENST00000506767 G3BP2Q9UN86 482 aaKnown RBP11.97□□□□□ -0.49
TCOF1-210ENST00000506767 ANKRD11Q6UB99 2663 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 PTPRQQ9UMZ3 2332 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 SHOX2O60902 331 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 SCN2BO60939 215 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 SLC22A3O75751 556 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 DNAJB5O75953 348 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 IFI6P09912 130 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 ITGAMP11215 1152 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NT5EP21589 574 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NTSP30990 170 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 CLCN2P51788 898 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NCBP2P52298 156 aaKnown RBP eCLIP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NME5P56597 212 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 WNT3P56703 355 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 AP2B1P63010 937 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 PHC1P78364 1004 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 SRSF11Q05519 484 aaKnown RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF267Q14586 743 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 RPS6KA2Q15349 733 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 LTB4RQ15722 352 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 JMJD6Q6NYC1 403 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 FAM111BQ6SJ93 734 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 MIER2Q8N344 545 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 ZNF321PQ8N8H1 164 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 GLB1L3Q8NCI6 653 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 DOK4Q8TEW6 326 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 EXTL1Q92935 676 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NCLNQ969V3 563 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 ZBED6CLQ96FA7 236 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 VMP1Q96GC9 406 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 THOC3Q96J01 351 aaKnown RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 ART5Q96L15 291 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 RILPQ96NA2 401 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 LHPPQ9H008 270 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 TMEM45AQ9NWC5 275 aa11.96□□□□□ -0.49
TCOF1-210ENST00000506767 COPG1Q9Y678 874 aaKnown RBP11.96□□□□□ -0.49
TCOF1-210ENST00000506767 MED13Q9UHV7 2174 aa11.96□□□□□ -0.5
TCOF1-210ENST00000506767 DSPP15924 2871 aaKnown RBP11.96□□□□□ -0.5
TCOF1-210ENST00000506767 PLOD2O00469 737 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 DYRK3O43781 588 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PLOD3O60568 738 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 SLITRK5O94991 958 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ITGA3P26006 1051 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PTGER1P34995 402 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 CCL11P51671 97 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PGDP52209 483 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 SLC37A1P57057 533 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 RHDQ02161 417 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 MYBPC3Q14896 1274 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PGS1Q32NB8 556 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 TRMT12Q53H54 448 aaKnown RBP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 FHL5Q5TD97 284 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 OR4F3Q6IEY1 312 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PAOXQ6QHF9 649 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ZNF551Q7Z340 670 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ARMC10Q8N2F6 343 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 KIF2BQ8N4N8 673 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 CPSF7Q8N684 471 aaKnown RBP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ZNF615Q8N8J6 731 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ADCY4Q8NFM4 1077 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 FDCSPQ8NFU4 85 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 OR9A2Q8NGT5 310 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 OR8K3Q8NH51 312 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 PSMA8Q8TAA3 256 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ERP27Q96DN0 273 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ELAC2Q9BQ52 826 aaKnown RBP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 OR8D2Q9GZM6 311 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 EPN3Q9H201 632 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ZNF552Q9H707 407 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-210ENST00000506767 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 ERVK-19Q9WJR5 959 aa11.95□□□□□ -0.5
TCOF1-210ENST00000506767 DOCK10Q96BY6 2186 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 A0A087WV62 115 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 A0A1W2PRB8 838 aa11.94□□□□□ -0.5
TCOF1-210ENST00000506767 TMEM200CA6NKL6 621 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms