RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 KLHL2O95198 593 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LGI1O95970 557 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 GSRP00390 522 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 APOHP02749 345 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 IVLP07476 585 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 FRMD6-AS1P0C7T7 363 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KRT3P12035 628 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PAICSP22234 425 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PSMB4P28070 264 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TIA1P31483 386 aaKnown RBP eCLIP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SYKP43405 635 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CDKN1BP46527 198 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 MTCP1P56278 107 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 MRPS15P82914 257 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OTUD4Q01804 1114 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CDR2Q01850 454 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 XRCC4Q13426 336 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RFTN1Q14699 578 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RBBP7Q16576 425 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LACTB2Q53H82 288 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TMEM41BQ5BJD5 291 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KCTD11Q693B1 232 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZNF600Q6ZNG1 722 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TMEM26Q6ZUK4 368 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SH2D5Q6ZV89 423 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 G2E3Q7L622 706 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NRARPQ7Z6K4 114 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CDR2LQ86X02 465 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 EFCAB13Q8IY85 973 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 CENPLQ8N0S6 344 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 RNF10Q8N5U6 811 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZNF565Q8N9K5 539 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 C17orf47Q8NEP4 570 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PIBF1Q8WXW3 757 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 PIGBQ92521 554 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZNF707Q96C28 371 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SNRNP40Q96DI7 357 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 MSANTD3Q96H12 275 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ANKRD27Q96NW4 1050 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 BBS2Q9BXC9 721 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OR2B2Q9GZK3 357 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 SIRPDQ9H106 197 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 UBQLN3Q9H347 655 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ACTL8Q9H568 366 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TLE6Q9H808 572 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 TREM1Q9NP99 234 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KCNMB3Q9NPA1 279 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ZCCHC3Q9NUD5 404 aaKnown RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 OR6C2Q9NZP2 312 aa3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 KLHL8Q9P2G9 620 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 C19orf25Q9UFG5 118 aaPredicted RBP3.35□□□□□ -1.87
THUMPD3P1-201ENST00000506556 ABCA9Q8IUA7 1624 aa3.34□□□□□ -1.87
THUMPD3P1-201ENST00000506556 NUP153P49790 1475 aaKnown RBP3.34□□□□□ -1.87
THUMPD3P1-201ENST00000506556 LTBP4Q8N2S1 1624 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 OR52A4PA6NMU1 304 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 EPHB6O15197 1021 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ADAM12O43184 909 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ZW10O43264 779 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 PPIP5K2O43314 1243 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ZNF208O43345 1280 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 FCGR3BO75015 233 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ATP6V1G1O75348 118 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 EML2O95834 649 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 AGTP01019 485 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 CXCL10P02778 98 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ASNSP08243 561 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ZCCHC18P0CG32 403 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 GP1BBP13224 206 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 U2AF2P26368 475 aaKnown RBP eCLIP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 DLSTP36957 453 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 MAGEA11P43364 429 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 CNN1P51911 297 aaKnown RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 MAP3K7CLP57077 242 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 LINC01547P58512 204 aaPredicted RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 RPS8P62241 208 aaKnown RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 RPP38P78345 283 aaKnown RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 IRX1P78414 480 aaPredicted RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 CACNG1Q06432 222 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ASPHQ12797 758 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 TRAP1Q12931 704 aaKnown RBP3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 TNK1Q13470 666 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 P2RY6Q15077 328 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 TEAD2Q15562 447 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 GTDC1Q4AE62 458 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 HIKESHIQ53FT3 197 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 RABGAP1LQ5R372 815 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 PIP5KL1Q5T9C9 394 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 AGBL2Q5U5Z8 902 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 NCR3LG1Q68D85 454 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 TXNRD3NBQ6F5E7 133 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 ERO1BQ86YB8 467 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 SIAH3Q8IW03 269 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 UBQLNLQ8IYU4 475 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 CSGALNACT2Q8N6G5 542 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 FADS6Q8N9I5 356 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 KIAA0895Q8NCT3 520 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 OR10Q1Q8NGQ4 319 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 CLHC1Q8NHS4 586 aa3.34□□□□□ -1.88
THUMPD3P1-201ENST00000506556 OLIG1Q8TAK6 271 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms