RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ASPHQ12797 758 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ZNF750Q32MQ0 723 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 GGTA1PQ4G0N0 100 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 CMPK2Q5EBM0 449 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 PIGGQ5H8A4 983 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 HLA-DQA1Q5Y7H0 255 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 SLC22A10Q63ZE4 541 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 C18orf63Q68DL7 685 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 C16orf47Q6ZP98 133 aaPredicted RBP9.64□□□□□ -0.87
NR1I3-222ENST00000506018 GDF7Q7Z4P5 450 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 CD163Q86VB7 1156 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 EXOC3L1Q86VI1 746 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 MCEMP1Q8IX19 187 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 TAGAPQ8N103 731 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 FAM109AQ8N4B1 249 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 RNF175Q8N4F7 328 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ASB5Q8WWX0 329 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ARL8AQ96BM9 186 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 PPWD1Q96BP3 646 aaKnown RBP9.64□□□□□ -0.87
NR1I3-222ENST00000506018 MTFMTQ96DP5 389 aaKnown RBP9.64□□□□□ -0.87
NR1I3-222ENST00000506018 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 GAL3ST4Q96RP7 486 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 DEFB127Q9H1M4 99 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 IL1RL2Q9HB29 575 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 KCNK9Q9NPC2 374 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 NKIRAS1Q9NYS0 192 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 MID2Q9UJV3 735 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ADAM29Q9UKF5 820 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 PCTPQ9UKL6 214 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 SNX6Q9UNH7 406 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 OR14I1A6ND48 311 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 LRRC14BA6NHZ5 514 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 FAM166BA8MTA8 275 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 OR7A17O14581 309 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 BCKDKO14874 412 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TM9SF1O15321 606 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 WISP2O76076 250 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 PDE9AO76083 593 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ZWINTO95229 277 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 IGKV3-11P04433 115 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SLC35E2P0CK97 266 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 CRHR1P34998 444 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TMED10P49755 219 aaKnown RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 NEK2P51955 445 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 NRG3P56975 720 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 HERVK_113P63132 956 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ERVK-8P63133 956 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SLC18A2Q05940 514 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ZNF267Q14586 743 aaPredicted RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 CCDC153Q494R4 210 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 CCNYL2Q5T2Q4 361 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 MRM1Q6IN84 353 aaKnown RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ACAD11Q709F0 780 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 OR4K14Q8NGD5 310 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 OR52B6Q8NGF0 335 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 OR52N2Q8NGI0 321 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 MZB1Q8WU39 189 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SDCCAG3Q96C92 435 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SPACA9Q96E40 222 aaPredicted RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 APOPT1Q96IL0 206 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ERVK-6Q9BXR3 956 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TTTY12Q9BZ98 90 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 LDAHQ9H6V9 325 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 EXO5Q9H790 373 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 BRF2Q9HAW0 419 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SEMA4BQ9NPR2 832 aaPredicted RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 MKS1Q9NXB0 559 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 CNIH4Q9P003 139 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 B4GALT7Q9UBV7 327 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 PSME2Q9UL46 239 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 BOKQ9UMX3 212 aaPredicted RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ERVK-19Q9WJR5 959 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 STK38LQ9Y2H1 464 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 ASB4Q9Y574 426 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 C2orf92A0A1B0GVN3 265 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 A0A1W2PPM1 405 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 A0A1W2PR48 441 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 GLOD5A6NK44 160 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 GOLGA8RI6L899 631 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TP53I11O14683 189 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TMPRSS11DO60235 418 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 EEDO75530 441 aaKnown RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 AIFM1O95831 613 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 KLK1P06870 262 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 FREM3P0C091 2139 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
NR1I3-222ENST00000506018 MAPK12P53778 367 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 KCNJ2P63252 427 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 SLC10A1Q14973 349 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TTMPQ5BVD1 217 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 TBCELQ5QJ74 424 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 GALNT12Q8IXK2 581 aa9.63□□□□□ -0.87
NR1I3-222ENST00000506018 C9orf40Q8IXQ3 194 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms