RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	LTB4R	Q15722	352 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FAM174B	Q3ZCQ3	159 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MINDY4	Q4G0A6	757 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	TRMT12	Q53H54	448 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PAGE3	Q5JUK9	113 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	DCAF10	Q5QP82	559 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PLAG1	Q6DJT9	500 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FAM111B	Q6SJ93	734 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	LYPD8	Q6UX82	237 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF551	Q7Z340	670 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SPATA21	Q7Z572	469 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF227	Q86WZ6	799 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	APLF	Q8IW19	511 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CLECL1	Q8IZS7	167 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR2L13	Q8N349	312 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FITM2	Q8N6M3	262 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZNF441	Q8N8Z8	693 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR7G2	Q8NG99	324 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR4K14	Q8NGD5	310 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	GTF2H4	Q92759	462 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADIPOR1	Q96A54	375 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PPWD1	Q96BP3	646 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FBXL20	Q96IG2	436 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CNTNAP3B	Q96NU0	1288 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ELAC2	Q9BQ52	826 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CNTNAP3	Q9BZ76	1288 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SERHL2	Q9H4I8	314 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PRORY	Q9H606	182 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CPNE5	Q9HCH3	593 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADAP2	Q9NPF8	381 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAP10	Q9P2G4	905 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	UTS2R	Q9UKP6	389 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZMIZ1	Q9ULJ6	1067 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAN2B2	Q9Y2E5	1009 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CHD6	Q8TD26	2715 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	NCKAP5	O14513	1909 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	UPK1A	O00322	258 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	RNASET2	O00584	256 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CLDN4	O14493	209 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	AKAP10	O43572	662 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PLOD3	O60568	738 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	NME6	O75414	186 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PGR	P06401	933 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CT45A8	P0DMV1	189 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CT45A9	P0DMV2	189 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	T-ENOL	P0DO92	83 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	POR	P16435	677 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PCSK2	P16519	638 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	EFNA1	P20827	205 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAPK1	P28482	360 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADSL	P30566	484 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SOX11	P35716	441 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FEN1	P39748	380 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FOLR3	P41439	243 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CDKN2C	P42773	168 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAN2A2	P49641	1150 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	EMD	P50402	254 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CDK9	P50750	372 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	DGKQ	P52824	942 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MRPS35	P82673	323 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PSG6	Q00889	435 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SLC13A2	Q13183	592 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	BIK	Q13323	160 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	GAB1	Q13480	694 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	UBAP2L	Q14157	1087 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	MAPK11	Q15759	364 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	DPY19L1	Q2PZI1	675 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	LINC00303	Q3SY05	128 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SFT2D3	Q587I9	215 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CT45A2	Q5DJT8	189 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	LRIF1	Q5T3J3	769 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	FAAH2	Q6GMR7	532 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR4F3	Q6IEY1	312 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PAPD4	Q6PIY7	484 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	IGFL2	Q6UWQ7	119 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	TREML4	Q6UXN2	200 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	DLEU7	Q6UYE1	221 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	C9orf40	Q8IXQ3	194 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCDC116	Q8IYX3	515 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	KIF2B	Q8N4N8	673 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	B3GNT7	Q8NFL0	401 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ADCY4	Q8NFM4	1077 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR1N1	Q8NGS0	311 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	OR9A2	Q8NGT5	310 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	VPS33A	Q96AX1	596 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	EXOSC8	Q96B26	276 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	KLHL29	Q96CT2	875 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	ELP4	Q96EB1	424 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SENP5	Q96HI0	755 aa	Predicted RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	CCDC115	Q96NT0	180 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	NUDT9	Q9BW91	350 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	SLC7A5P2	Q9GIP4	190 aa		4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	PAIP1	Q9H074	479 aa	Known RBP	4.6	□□□□□ -1.67
LMNB1-208	ENST00000504788	RABEP2	Q9H5N1	569 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms