RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 P3H2Q8IVL5 708 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 RASGEF1CQ8N431 466 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 NKAPQ8N5F7 415 aaKnown RBP8.32□□□□□ -1.08
DHFR-202ENST00000504396 SLC15A4Q8N697 577 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 SNX31Q8N9S9 440 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 SRFBP1Q8NEF9 429 aaKnown RBP8.32□□□□□ -1.08
DHFR-202ENST00000504396 NEIL3Q8TAT5 605 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
DHFR-202ENST00000504396 CERS2Q96G23 380 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 DGAT2Q96PD7 388 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 KRT12Q99456 494 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 TMPRSS13Q9BYE2 586 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 EPB41L4BQ9H329 900 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 EHD1Q9H4M9 534 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 WWOXQ9NZC7 414 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 GPRC5BQ9NZH0 403 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.32□□□□□ -1.08
DHFR-202ENST00000504396 DCTN4Q9UJW0 460 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 IKZF3Q9UKT9 509 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 CAMK2AQ9UQM7 478 aa8.32□□□□□ -1.08
DHFR-202ENST00000504396 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 HMX2A2RU54 273 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 KDM4EB2RXH2 506 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 CYR61O00622 381 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 SMAD7O15105 426 aaKnown RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 ARHGEF9O43307 516 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 SH3BGRLO75368 114 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF37AP17032 561 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 CPN2P22792 545 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 KCNC1P48547 511 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 MASP1P48740 699 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 FNTAP49354 379 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 DUSP8Q13202 625 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF460Q14592 562 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 DAZAP2Q15038 168 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 PPP1R7Q15435 360 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 HP1BP3Q5SSJ5 553 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 TEX35Q5T0J7 233 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 RNASEH2BQ5TBB1 312 aaKnown RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 ADNP2Q6IQ32 1131 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ABHD17CQ6PCB6 329 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 SLC29A4Q7RTT9 530 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ADAMTSL2Q86TH1 951 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 OR4N5Q8IXE1 308 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 C9orf40Q8IXQ3 194 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 OR10G3Q8NGC4 313 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 NUBPLQ8TB37 319 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 DOK4Q8TEW6 326 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF721Q8TF20 911 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 PBKQ96KB5 322 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 KCNC2Q96PR1 638 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 F2RL3Q96RI0 385 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 LYRM4Q9HD34 91 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ACKR4Q9NPB9 350 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.31□□□□□ -1.081e-13■■■■■ 115.5
DHFR-202ENST00000504396 ARGLU1Q9NWB6 273 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF446Q9NWS9 450 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 CTNNAL1Q9UBT7 734 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 ZNF629Q9UEG4 869 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 RNF112Q9ULX5 631 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 OARD1Q9Y530 152 aa8.31□□□□□ -1.08
DHFR-202ENST00000504396 V9GYY5 206 aaPredicted RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 FLNAP21333 2647 aaKnown RBP8.31□□□□□ -1.08
DHFR-202ENST00000504396 IQANK1A0A1B0GTG1 560 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 LRRC3CA6NJW4 275 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 AHRRA9YTQ3 701 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 RTCAO00442 366 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 CES2O00748 559 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 ERN1O75460 977 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 EPPINO95925 133 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PCNAP12004 261 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 MAPK1P28482 360 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 SERPINB3P29508 390 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 HOXC12P31275 282 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 SSR2P43308 183 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 RPL21P46778 160 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 SLC6A12P48065 614 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 ZNF136P52737 540 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PPP2R2BQ00005 443 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PLIN5Q00G26 463 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 FRG1Q14331 258 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 TSNQ15631 228 aaKnown RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 ZNF791Q3KP31 576 aaPredicted RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 FBXO48Q5FWF7 155 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PIGGQ5H8A4 983 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 CDKL4Q5MAI5 379 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 Q5PR19 223 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 TEDDM1Q5T9Z0 273 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 SHEQ5VZ18 495 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PM20D2Q8IYS1 436 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 LRRC25Q8N386 305 aaPredicted RBP8.3□□□□□ -1.08
DHFR-202ENST00000504396 TCAIMQ8N3R3 496 aa8.3□□□□□ -1.08
DHFR-202ENST00000504396 PAQR8Q8TEZ7 354 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms