RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 LPAR4Q99677 370 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 PELOQ9BRX2 385 aaKnown RBP9.38□□□□□ -0.91
NUP54-203ENST00000504173 TMEM120AQ9BXJ8 343 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 DPY30Q9C005 99 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 FAM107BQ9H098 131 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 REEP4Q9H6H4 257 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 ADAP2Q9NPF8 381 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 GIMAP4Q9NUV9 329 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 AIG1Q9NVV5 245 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 SH3BP4Q9P0V3 963 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 FBXL4Q9UKA2 621 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 CES1P1Q9UKY3 287 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 ENTPD4Q9Y227 616 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 POLHQ9Y253 713 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
NUP54-203ENST00000504173 IGHV1-45A0A0A0MS14 117 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 NSG1A0A0A6YYJ2 146 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 SCAMP2O15127 329 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 SEMA7AO75326 666 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 SEC24DO94855 1032 aaPredicted RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 HPP00738 406 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 COX6A1P12074 109 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 COX7A2P14406 83 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 IDO1P14902 403 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 PORP16435 677 aaPredicted RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 PCSK2P16519 638 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 TNNI3P19429 210 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 CSNK2A2P19784 350 aaPredicted RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 PRPS1L1P21108 318 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 NTSP30990 170 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 FEN1P39748 380 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 ARFIP2P53365 341 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 NME5P56597 212 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 CLDN8P56748 225 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 STX1BP61266 288 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 PCOLCEQ15113 449 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 ELAVL1Q15717 326 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 GSTA3Q16772 222 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 ANKRD26P1Q6NSI1 321 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 FAM180BQ6P0A1 224 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 PAPD4Q6PIY7 484 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 NDUFAF7Q7L592 441 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 CPLX4Q7Z7G2 160 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 SAMD14Q8IZD0 417 aaPredicted RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 SLC34A3Q8N130 599 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 KRTCAP2Q8N6L1 136 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 OR11G2Q8NGC1 345 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 MTERF3Q96E29 417 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 RBM18Q96H35 190 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 FER1L6-AS2Q96M78 137 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 CATSPER2Q96P56 530 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 BBS4Q96RK4 519 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 PRPF18Q99633 342 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 KCNK13Q9HB14 408 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 SLC35C2Q9NQQ7 365 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 EXO1Q9UQ84 846 aaKnown RBP9.37□□□□□ -0.91
NUP54-203ENST00000504173 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
NUP54-203ENST00000504173 A0A1W2PQ72 361 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 A0A1W2PS29 197 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 SAGE2PA6NJ88 616 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ARGFXA6NJG6 315 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 GABRR3A8MPY1 467 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 C17orf105B2RV13 164 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 PDPK1O15530 556 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 DYRK3O43781 588 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 TBX19O60806 448 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 SLC35E2P0CK97 266 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 CPMP14384 443 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 NT5EP21589 574 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 DRD4P21917 467 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 STT3AP46977 705 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 CLNS1AP54105 237 aaKnown RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 RRADP55042 308 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 C21orf58P58505 322 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 PDE7AQ13946 482 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 EXT1Q16394 746 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ZNF750Q32MQ0 723 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 PDCD4Q53EL6 469 aaKnown RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 ZNF385BQ569K4 471 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 DCAF10Q5QP82 559 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 CPTPQ5TA50 214 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 C6orf163Q5TEZ5 329 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 SPATA21Q7Z572 469 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 ST13P4Q8IZP2 240 aaPredicted RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 LRRC25Q8N386 305 aaPredicted RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 OR7A2PQ8NGA2 310 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 OR14A16Q8NHC5 309 aa9.36□□□□□ -0.91
NUP54-203ENST00000504173 DAZLQ92904 295 aaKnown RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 PPWD1Q96BP3 646 aaKnown RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 CNRIP1Q96F85 164 aaPredicted RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 ZNF764Q96H86 408 aaPredicted RBP9.36□□□□□ -0.91
NUP54-203ENST00000504173 ZBTB18Q99592 522 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms