RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 GIPC3Q8TF64 312 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TMIGD2Q96BF3 282 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF607Q96SK3 696 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 RIBC2Q9H4K1 309 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 BCL2L10Q9HD36 194 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 ACER3Q9NUN7 267 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 KIF17Q9P2E2 1029 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TRPC4Q9UBN4 977 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SLC22A7Q9Y694 548 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TLR4O00206 839 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 B4GAT1O43505 415 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 IL7RP16871 459 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TYRP1P17643 537 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF10P21506 573 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 MAOBP27338 520 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 KCNJ5P48544 419 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 ANXA11P50995 505 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 PRKAG1P54619 331 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 DYNC1I2Q13409 638 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 RAPSNQ13702 412 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 LASP1Q14847 261 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 ELOCQ15369 112 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SIX5Q8N196 739 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SPEM1Q8N4L4 309 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 CSF3RQ99062 836 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 SEMA6CQ9H3T2 930 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 LYRM4Q9HD34 91 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 TMEM74BQ9NUR3 256 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 MS4A12Q9NXJ0 267 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 GPC6Q9Y625 555 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 CEPT1Q9Y6K0 416 aa20.1■□□□□ 0.81
UBE2D3-216ENST00000503742 IFNW1P05000 195 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 MC3RP41968 323 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 FASLGP48023 281 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 CDH12P55289 794 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 MAZP56270 477 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 PRR5P85299 388 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 FUT5Q11128 374 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 SIM2Q14190 667 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 AP1ARQ63HQ0 302 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 ZNF655Q8N720 491 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 TTC29Q8NA56 475 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 RASSF5Q8WWW0 418 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 KCND3Q9UK17 655 aa20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 NDRG4Q9ULP0 352 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-216ENST00000503742 A8MVJ9 347 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 EIF2S1P05198 315 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 NR2F1P10589 423 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 IL1RL1Q01638 556 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 MICAQ29983 383 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 SAMD14Q8IZD0 417 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 NUP43Q8NFH3 380 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 GABARAPL3Q9BY60 117 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 C3orf14Q9HBI5 128 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 NTMQ9P121 344 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 HSPE1-MOB4S4R3N1 261 aa20.08■□□□□ 0.81
UBE2D3-216ENST00000503742 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 H3BSA7 217 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 SERPINB7O75635 380 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 CYP4B1P13584 511 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 ST6GAL1P15907 406 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 EPHA2P29317 976 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 PPP2R1BP30154 601 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 GSTT1P30711 240 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 MAN2A2P49641 1150 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 LTB4RQ15722 352 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 EXOC3L2Q2M3D2 409 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 PUS10Q3MIT2 529 aaKnown RBP20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 ARMC6Q6NXE6 501 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 ZNF773Q6PK81 442 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 LGI4Q8N135 537 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 LRRC25Q8N386 305 aaPredicted RBP20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 ARL14Q8N4G2 192 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 AVL9Q8NBF6 648 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 SETD9Q8NE22 299 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 OR10G2Q8NGC3 310 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 OR4K14Q8NGD5 310 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 C1orf216Q8TAB5 229 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 CLDN23Q96B33 292 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 GIMAP5Q96F15 307 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 C16orf58Q96GQ5 468 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 COL21A1Q96P44 957 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 FEVQ99581 238 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 PITX2Q99697 317 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 PSD2Q9BQI7 771 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 YIPF4Q9BSR8 244 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 NPLQ9BXD5 320 aaPredicted RBP20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 UCK1Q9HA47 277 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 VCX3AQ9NNX9 186 aa20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 FAM32AQ9Y421 112 aaKnown RBP20.08■□□□□ 0.8
UBE2D3-216ENST00000503742 HCRTR1O43613 425 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 TLX1P31314 330 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 XKP51811 444 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 CRISP3P54108 245 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 RPL6Q02878 288 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 NPRL3Q12980 569 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 USP53Q70EK8 1073 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 PRSS41Q7RTY9 318 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 GKN2Q86XP6 184 aa20.07■□□□□ 0.8
UBE2D3-216ENST00000503742 CAMKK1Q8N5S9 505 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms