RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CD1DP15813 335 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 FOXF2Q12947 444 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 NHSL2Q5HYW2 709 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 CDKL4Q5MAI5 379 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 WIPI1Q5MNZ9 446 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-212ENST00000498540 Q5PR19 223 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 MED27Q6P2C8 311 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 SYDE1Q6ZW31 735 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-212ENST00000498540 GPR180Q86V85 440 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 OR7G3Q8NG95 312 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 SPPL2AQ8TCT8 520 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 EXT2Q93063 718 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 COX4I2Q96KJ9 171 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 TEX10Q9NXF1 929 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-212ENST00000498540 MS4A12Q9NXJ0 267 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
TRAF4-212ENST00000498540 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 TLN2Q9Y4G6 2542 aa13.43□□□□□ -0.26
TRAF4-212ENST00000498540 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 OR6C76A6NM76 312 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 PLPP1O14494 284 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 TP53I11O14683 189 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 OR10H2O60403 315 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 IL18BPO95998 194 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 TMIGD3P0DMS9 266 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 SSTR4P31391 388 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 GMPRP36959 345 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 SLCO1A2P46721 670 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 MASP1P48740 699 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 SLC12A2P55011 1212 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 POU4F1Q01851 419 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 BIKQ13323 160 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 DDX39BQ13838 428 aaKnown RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 TOMM20Q15388 145 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 SF3B4Q15427 424 aaKnown RBP eCLIP13.42□□□□□ -0.269e-7■■■□□ 17.6
TRAF4-212ENST00000498540 DEPDC1Q5TB30 811 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 LRRC70Q7Z2Q7 622 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 LUZP2Q86TE4 346 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 FBXO36Q8NEA4 188 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 RIT1Q92963 219 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 UBE2E3Q969T4 207 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 DACH2Q96NX9 599 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 PELOQ9BRX2 385 aaKnown RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
TRAF4-212ENST00000498540 ANGPTL4Q9BY76 406 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 CD244Q9BZW8 370 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 CALHM2Q9HA72 323 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 SMYD2Q9NRG4 433 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 ZANQ9Y493 2812 aa13.42□□□□□ -0.26
TRAF4-212ENST00000498540 ARID1AO14497 2285 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 C2orf92A0A1B0GVN3 265 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 A0A1W2PS29 197 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 SH3D21A4FU49 640 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 FAM171A2A8MVW0 826 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 H7C1Q1 480 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 ERN1O75460 977 aaKnown RBP13.41□□□□□ -0.26
TRAF4-212ENST00000498540 SNX4O95219 450 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 GPR75O95800 540 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 PCSK6P29122 969 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 TLX1P31314 330 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-212ENST00000498540 CASP3P42574 277 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 RAP1GDS1P52306 607 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 NAGLUP54802 743 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 ARL4CP56559 192 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 PLXDC2Q6UX71 529 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 PACS2Q86VP3 889 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 MED12LQ86YW9 2145 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 LRRC8AQ8IWT6 810 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 PRR22Q8IZ63 422 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 ZCCHC7Q8N3Z6 543 aaKnown RBP13.41□□□□□ -0.26
TRAF4-212ENST00000498540 HUS1BQ8NHY5 278 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 SLC44A1Q8WWI5 657 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 ZNF592Q92610 1267 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 UCN3Q969E3 161 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 RGMAQ96B86 450 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
TRAF4-212ENST00000498540 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
TRAF4-212ENST00000498540 RNF112Q9ULX5 631 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 CSPG4Q6UVK1 2322 aa13.41□□□□□ -0.26
TRAF4-212ENST00000498540 A0A1W2PR48 441 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 CAPN14A8MX76 684 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 GNB5O14775 395 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 TP73O15350 636 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 ARHGEF9O43307 516 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 EEDO75530 441 aaKnown RBP13.4□□□□□ -0.26
TRAF4-212ENST00000498540 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-212ENST00000498540 NR2F6P10588 404 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 PTPN6P29350 595 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 SERPINB1P30740 379 aa13.4□□□□□ -0.26
TRAF4-212ENST00000498540 BUD31P41223 144 aaPredicted RBP13.4□□□□□ -0.26
TRAF4-212ENST00000498540 CPA2P48052 419 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms