RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 IRF8Q02556 426 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 C18orf63Q68DL7 685 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 SPPL2AQ8TCT8 520 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 ZPLD1Q8TCW7 415 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 ZNF473Q8WTR7 871 aaKnown RBP12.72□□□□□ -0.37
CCDC58-207ENST00000498466 RIT1Q92963 219 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 WDR34Q96EX3 536 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 CCL19Q99731 98 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
CCDC58-207ENST00000498466 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
CCDC58-207ENST00000498466 ANGPTL4Q9BY76 406 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
CCDC58-207ENST00000498466 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 PSAT1Q9Y617 370 aa12.72□□□□□ -0.37
CCDC58-207ENST00000498466 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 C2orf92A0A1B0GVN3 265 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 GNB5O14775 395 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 FPR1P21462 350 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 GCKP35557 465 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SOX18P35713 384 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 GGT5P36269 586 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 CPOXP36551 454 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 ELK3P41970 407 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SLCO1A2P46721 670 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 NAGLUP54802 743 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 DIO3P55073 304 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TNFRSF17Q02223 184 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 CHIT1Q13231 466 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 FNDC7Q5VTL7 733 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 YRDCQ86U90 279 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 GPR180Q86V85 440 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 ZC3HC1Q86WB0 502 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 GPSM1Q86YR5 675 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 FAM83FQ8NEG4 500 aaPredicted RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 INTS12Q96CB8 462 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 NTNG2Q96CW9 530 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 ZFP3Q96NJ6 502 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 NAP1L3Q99457 506 aaPredicted RBP12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TM9SF2Q99805 663 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TUBA1CQ9BQE3 449 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 OR51B5Q9H339 312 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 SNX15Q9NRS6 342 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TRPS1Q9UHF7 1281 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 PHF11Q9UIL8 331 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 TESMINQ9Y4I5 508 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 NPFFR2Q9Y5X5 522 aa12.71□□□□□ -0.37
CCDC58-207ENST00000498466 ZANQ9Y493 2812 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 H0Y3Z8 333 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 CCNT2O60583 730 aaKnown RBP12.7□□□□□ -0.38
CCDC58-207ENST00000498466 RCBTB2O95199 551 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 ACTL6AO96019 429 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 CLPSP04118 112 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 BUD31P41223 144 aaPredicted RBP12.7□□□□□ -0.38
CCDC58-207ENST00000498466 CASP3P42574 277 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 FNTAP49354 379 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 RAP1GDS1P52306 607 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 SLC12A2P55011 1212 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 NRG3P56975 720 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 SRYQ05066 204 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 PCDH1Q08174 1060 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 SETDB1Q15047 1291 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 TBCCQ15814 346 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 ACKR1Q16570 336 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 KHDRBS2Q5VWX1 349 aaKnown RBP12.7□□□□□ -0.38
CCDC58-207ENST00000498466 MED27Q6P2C8 311 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 ZNF662Q6ZS27 426 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 PDIK1LQ8N165 341 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 TP53INP1Q96A56 240 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 CMTM7Q96FZ5 175 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 TMEM41AQ96HV5 264 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 DERL2Q9GZP9 239 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 OCEL1Q9H607 264 aa12.7□□□□□ -0.38
CCDC58-207ENST00000498466 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 COL6A5A8TX70 2615 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 A8MXE2 369 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 GOLGA6L6A8MZA4 724 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CTIFO43310 598 aaKnown RBP12.69□□□□□ -0.38
CCDC58-207ENST00000498466 GPR75O95800 540 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 CPN1P15169 458 aa12.69□□□□□ -0.38
CCDC58-207ENST00000498466 EPORP19235 508 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms