RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 C17orf64Q86WR6 236 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 AQP11Q8NBQ7 271 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TP53I13Q8NBR0 393 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 DHRS1Q96LJ7 313 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 C1QTNF2Q9BXJ5 285 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ZDHHC5Q9C0B5 715 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 BTBD1Q9H0C5 482 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 OR52A5Q9H2C5 316 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ZBTB20Q9HC78 741 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 WASH6PQ9NQA3 447 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 MBNL1Q9NR56 388 aaKnown RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 ACSS1Q9NUB1 689 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 MS4A12Q9NXJ0 267 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 GPR83Q9NYM4 423 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TAAR2Q9P1P5 351 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ASF1AQ9Y294 204 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 WDR37Q9Y2I8 494 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 DSPPQ9NZW4 1301 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3DA0A087WVF3 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3IA0A087WXS9 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3EA0A087X179 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3KA0A087X1G2 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 IGHV1OR15-9A0A0B4J2B8 117 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3FA6NER0 549 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 PRAMEF25A6NGN4 478 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 LOC110117498-PIK3R3F6TDL0 507 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 CCRL2O00421 344 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 PDPK1O15530 556 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 SEMA4FO95754 770 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 PAK4O96013 591 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 PCCBP05166 539 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 STSP08842 583 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 OSMP13725 252 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 CHMP24386 653 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 MAPK12P53778 367 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 UGT2B15P54855 530 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 RHAGQ02094 409 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ILKQ13418 452 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 IRF4Q15306 451 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ZNF770Q6IQ21 691 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 CEACAM20Q6UY09 585 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 PTCHD4Q6ZW05 846 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TRIM74Q86UV6 250 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TRIM73Q86UV7 250 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 KRT73Q86Y46 540 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 RAB42Q8N4Z0 105 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 FAM160A2Q8N612 972 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 B3GNT7Q8NFL0 401 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 RLN3Q8WXF3 142 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 PIK3R3Q92569 461 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ZBED6CLQ96FA7 236 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 TOE1Q96GM8 510 aaKnown RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 IER2Q9BTL4 223 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ALOXE3Q9BYJ1 711 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 UCK2Q9BZX2 261 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 C6orf106Q9H6K1 298 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 FZD3Q9NPG1 666 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 ANKMY1Q9P2S6 941 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
AFF3-215ENST00000498090 ACSL6Q9UKU0 697 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 SH2B3Q9UQQ2 575 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 IFT52Q9Y366 437 aa11.78□□□□□ -0.52
AFF3-215ENST00000498090 NUMA1Q14980 2115 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 A0A075B6Q4 140 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 PRR33A8MZF0 331 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 GPR89AB7ZAQ6 455 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 SAP18O00422 153 aaKnown RBP11.77□□□□□ -0.53
AFF3-215ENST00000498090 PCDH17O14917 1159 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 KDM1AO60341 852 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 SLITRK5O94991 958 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 GBAP04062 536 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 GPR89BP0CG08 455 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 TNFRSF1BP20333 461 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 IGFALSP35858 605 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 SLC15A1P46059 708 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 CXCL12P48061 93 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 ANXA11P50995 505 aaKnown RBP11.77□□□□□ -0.53
AFF3-215ENST00000498090 CCR8P51685 355 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 MANFP55145 182 aaKnown RBP11.77□□□□□ -0.53
AFF3-215ENST00000498090 DEFA1P59665 94 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 DEFA3P59666 94 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 ALDH6A1Q02252 535 aaKnown RBP11.77□□□□□ -0.53
AFF3-215ENST00000498090 NCF4Q15080 339 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 TPRG1LQ5T0D9 272 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 KLHL17Q6TDP4 642 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 ADAMTSL4Q6UY14 1074 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 Q6ZPB1 254 aaPredicted RBP11.77□□□□□ -0.53
AFF3-215ENST00000498090 BMP8AQ7Z5Y6 402 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 AMZ2Q86W34 360 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 LYSMD2Q8IV50 215 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 ZNF547Q8IVP9 402 aa11.77□□□□□ -0.53
AFF3-215ENST00000498090 OR9Q2Q8NGE9 314 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms