RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MGRN1O60291 552 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 BCAS2O75934 225 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SLITRK5O94991 958 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 KRT75O95678 551 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 CCL4P13236 92 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 CPMP14384 443 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 PORP16435 677 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 TSPAN7P41732 249 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 MAGEA8P43361 318 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 XKP51811 444 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■■□□□ 12.9
VPS26A-209ENST00000497564 FOLH1Q04609 750 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 DUSP2Q05923 314 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 FADDQ13158 208 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 BIKQ13323 160 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 RIPK1Q13546 671 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 KPNB1Q14974 876 aaKnown RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 IGF2-ASQ6U949 168 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 PPP1R3BQ86XI6 285 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SPACA3Q8IXA5 215 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 TNIP2Q8NFZ5 429 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 PMEPA1Q969W9 287 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 ANKRD9Q96BM1 317 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 MOAP1Q96BY2 351 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 TBC1D20Q96BZ9 403 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 PEX11GQ96HA9 241 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 KCTD14Q9BQ13 255 aaPredicted RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 STRADBQ9C0K7 418 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 CHST8Q9H2A9 424 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 SEMA3GQ9NS98 782 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 NTMQ9P121 344 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 DHCR7Q9UBM7 475 aaKnown RBP13.31□□□□□ -0.28
VPS26A-209ENST00000497564 PISDQ9UG56 409 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 NDOR1Q9UHB4 597 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 EFCAB7A8K855 629 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FGF17O60258 216 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 CTNSO60931 367 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 SCRG1O75711 98 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 ATP1B1P05026 303 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FHP07954 510 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FBLP22087 321 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 ALAS2P22557 587 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 RBMS1P29558 406 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FEN1P39748 380 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 XCR1P46094 333 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 MVDP53602 400 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 HSD17B7P56937 341 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 MAT1AQ00266 395 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 MS4A2Q01362 244 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 HSPB3Q12988 150 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FLOT2Q14254 428 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 PRAMEF17Q5VTA0 474 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 PWWP2BQ6NUJ5 590 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 TMEM126BQ8IUX1 230 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 CCDC116Q8IYX3 515 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FAM156AQ8NDB6 213 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 OR2T12Q8NG77 320 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 OR10A6Q8NH74 314 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF675Q8TD23 568 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 JADE3Q92613 823 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 FAM120BQ96EK7 910 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 LANCL2Q9NS86 450 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 AKAP7Q9P0M2 348 aaPredicted RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 GMPR2Q9P2T1 348 aaKnown RBP13.3□□□□□ -0.28
VPS26A-209ENST00000497564 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 SNX13Q9Y5W8 968 aa13.3□□□□□ -0.28
VPS26A-209ENST00000497564 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 A0A1W2PS29 197 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 PLOD2O00469 737 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 CLDN4O14493 209 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-209ENST00000497564 TIAF1O95411 115 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 SLC35E2P0CK97 266 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 C8orf89P0DMQ9 161 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 BMP2P12643 396 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-209ENST00000497564 SLC5A2P31639 672 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 GPC1P35052 558 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 SOAT1P35610 550 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 CHI3L1P36222 383 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-209ENST00000497564 OR1D4P47884 311 aa13.29□□□□□ -0.28
VPS26A-209ENST00000497564 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
VPS26A-209ENST00000497564 OR4D2P58180 307 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms