RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	GPR31	O00270	319 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GFRA2	O00451	464 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EDIL3	O43854	480 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RBMS1	P29558	406 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CSF2RB	P32927	897 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EVX1	P49640	407 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMIM11A	P58511	58 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GLO1	Q04760	184 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AIMP2	Q13155	320 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PTPRCAP	Q14761	206 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FBXO48	Q5FWF7	155 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NHLRC3	Q5JS37	347 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OLFML2A	Q68BL7	652 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SFRP4	Q6FHJ7	346 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMYD5	Q6GMV2	418 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C15orf39	Q6ZRI6	1047 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM179B	Q7Z7N9	219 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC51A	Q86UW1	340 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR4C6	Q8NH72	309 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF599	Q96NL3	588 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SEMA4C	Q9C0C4	833 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZFP64	Q9NPA5	681 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C19orf12	Q9NSK7	152 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GAR1	Q9NY12	217 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TVP23B	Q9NYZ1	205 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CPA4	Q9UI42	421 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LAMP5	Q9UJQ1	280 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549		A0A0B4J293	547 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549		A0A0D9SG52	128 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549		A0A1W2PRB8	838 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NAP1L6	A6NFF2	107 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AGAP14	A8MT82	685 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CYTIP	O60759	359 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANXA5	P08758	320 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATP5A1	P25705	553 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CCR6	P51684	374 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACY1	Q03154	408 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MBTD1	Q05BQ5	628 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TKFC	Q3LXA3	575 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	UGT3A2	Q3SY77	523 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CARD16	Q5EG05	197 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C3orf38	Q5JPI3	329 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CYB5R2	Q6BCY4	276 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PRSS55	Q6UWB4	352 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC29A4	Q7RTT9	530 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ARMC10	Q8N2F6	343 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WDTC1	Q8N5D0	677 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR11H7	Q8NGC8	314 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RNF31	Q96EP0	1072 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAP3K3	Q99759	626 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KRCC1	Q9NPI7	259 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RBM22	Q9NW64	420 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SAGE1	Q9NXZ1	904 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ARHGAP28	Q9P2N2	729 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WRAP73	Q9P2S5	460 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CA14	Q9ULX7	337 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LAMB1	P07942	1786 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	COL18A1	P39060	1754 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GMFG	O60234	142 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KLK3	P07288	261 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	COX7A2	P14406	83 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATP5C1	P36542	298 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WNT4	P56705	351 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IL2	P60568	153 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF155	Q12901	538 aa	Predicted RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CAMK2D	Q13557	499 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR7E24	Q6IFN5	339 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR6V1	Q8N148	313 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC5A8	Q8N695	610 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GMCL1P1	Q8NEA9	526 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR8J1	Q8NGP2	316 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CCDC107	Q8WV48	283 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KLHL5	Q96PQ7	755 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF559	Q9BR84	538 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BRINP2	Q9C0B6	783 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BCO1	Q9HAY6	547 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IMP3	Q9NV31	184 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BTNL2	Q9UIR0	455 aa		7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EXO1	Q9UQ84	846 aa	Known RBP	7.81	□□□□□ -1.16
CRNKL1-205	ENST00000496549		A0A1B0GWJ7	208 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CLIC1	O00299	241 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR7A17	O14581	309 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TNFRSF10B	O14763	440 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CLN5	O75503	358 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AQP8	O94778	261 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACPP	P15309	386 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM11	P17152	192 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IL1RN	P18510	177 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANXA7	P20073	488 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC6A1	P30531	599 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CCR1	P32246	355 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GLP1R	P43220	463 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	STK19	P49842	368 aa	Predicted RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CRISP1	P54107	249 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AP1S1	P61966	158 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NKX6-1	P78426	367 aa	Predicted RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAT1A	Q00266	395 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DSC2	Q02487	901 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SOX4	Q06945	474 aa	Predicted RBP	7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms