RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CXCL11O14625 94 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 OGTO15294 1046 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CSO75390 466 aaKnown RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 PCCBP05166 539 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CT45A8P0DMV1 189 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CT45A9P0DMV2 189 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 GIFP27352 417 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 PDHA2P29803 388 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 MARCKSP29966 332 aaPredicted RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 PRDX6P30041 224 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 PKLRP30613 574 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 GPR183P32249 361 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 TNFRSF4P43489 277 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 MTIF2P46199 727 aaKnown RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 LIMK2P53671 638 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 SH3BGRP55822 239 aaPredicted RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 KCNK10P57789 538 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 NLRP11P59045 1033 aaKnown RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 OVGP1Q12889 678 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 SPP2Q13103 211 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 RAPSNQ13702 412 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 MEF2DQ14814 521 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 LPAL2Q16609 132 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 HLA-BQ31612 363 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 MAJINQ3KP22 176 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 ZNF528Q3MIS6 628 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CT45A2Q5DJT8 189 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 FRRS1Q6ZNA5 592 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 RFPL4BQ6ZWI9 263 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 ARMCX2Q7L311 632 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 BNIPLQ7Z465 357 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 OR4N5Q8IXE1 308 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 SPAG16Q8N0X2 631 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 RNF148Q8N7C7 305 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 OR5T2Q8NGG2 359 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 OR4D10Q8NGI6 311 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 OR10T2Q8NGX3 314 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 C8orf46Q8TAG6 207 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CHURC1Q8WUH1 139 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 P3H4Q92791 437 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 ART5Q96L15 291 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 CCT7Q99832 543 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 ASCL2Q99929 193 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 FTHL17Q9BXU8 183 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 BARHL1Q9BZE3 327 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 NMNAT2Q9BZQ4 307 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 TRPV6Q9H1D0 765 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 S100A14Q9HCY8 104 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 TRPV5Q9NQA5 729 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 ACOXLQ9NUZ1 547 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 RAI14Q9P0K7 980 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 THAP10Q9P2Z0 257 aaPredicted RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 CLIP2Q9UDT6 1046 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 NARFQ9UHQ1 456 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 DIMT1Q9UNQ2 313 aaKnown RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 KLHDC2Q9Y2U9 406 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 TMED5Q9Y3A6 229 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 MRPS18CQ9Y3D5 142 aaKnown RBP3.11□□□□□ -1.91
CLK1-214ENST00000496205 UMODL1Q5DID0 1318 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 IGHV3-38A0A0C4DH36 116 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CTAGE15A4D2H0 777 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MPTX1A8MV57 137 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 H0Y8G0 127 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 MAPK13O15264 365 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 TBX19O60806 448 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 NXPH2O95156 264 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 FGF19O95750 216 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 IGLV1-44P01699 117 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CALCBP10092 127 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CYP11B1P15538 503 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 TNNI3P19429 210 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 FUT1P19526 365 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 PRKACGP22612 351 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 HNRNPA2B1P22626 353 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 TMOD1P28289 359 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 TNNT2P45379 298 aaPredicted RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 NSFP46459 744 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 TRPC1P48995 793 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 FHITP49789 147 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 VCPP55072 806 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 MTTPP55157 894 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CCNA1P78396 465 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CCZ1BP86790 482 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CCZ1P86791 482 aaPredicted RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 DHODHQ02127 395 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 IL24Q13007 206 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 ITPK1Q13572 414 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 EXOSC7Q15024 291 aaKnown RBP3.1□□□□□ -1.91
CLK1-214ENST00000496205 CEBPEQ15744 281 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 SGSM1Q2NKQ1 1148 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 GPAT3Q53EU6 434 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 TMEM41BQ5BJD5 291 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 NKAIN2Q5VXU1 208 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 KIF6Q6ZMV9 814 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 TAS2R42Q7RTR8 314 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 CTAGE6Q86UF2 777 aa3.1□□□□□ -1.91
CLK1-214ENST00000496205 SLC22A16Q86VW1 577 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms