RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 NDUFAF2Q8N183 169 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 LRRC43Q8N309 656 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 GUF1Q8N442 669 aaKnown RBP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 MRPL43Q8N983 215 aaKnown RBP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 OR4K1Q8NGD4 311 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 MRPS27Q92552 414 aaKnown RBP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 PIK3R3Q92569 461 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 LPGAT1Q92604 370 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 SLAMF9Q96A28 289 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 SLC22A18Q96BI1 424 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 FAM122AQ96E09 287 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 MBOAT7Q96N66 472 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 NXF3Q9H4D5 531 aaKnown RBP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 POMKQ9H5K3 350 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 Q9H8V8 135 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 PDFQ9HBH1 243 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 XPNPEP1Q9NQW7 623 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 TBC1D13Q9NVG8 400 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 BCCIPQ9P287 314 aaKnown RBP eCLIP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 GPR34Q9UPC5 381 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 WDR83OSQ9Y284 106 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 PRG3Q9Y2Y8 225 aaPredicted RBP2.83□□□□□ -1.96
SRRM1-219ENST00000495561 MYH7BA7E2Y1 1941 aa2.83□□□□□ -1.96
SRRM1-219ENST00000495561 ARL5CA6NH57 179 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 LRRIQ4A6NIV6 560 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 PP2D1A8MPX8 630 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ARHGEF33A8MVX0 844 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 C2CD4DB7Z1M9 353 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 LOC730098B7Z3J9 87 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 E9PAM4 449 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 M0R296 226 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 SLC1A7O00341 560 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 NEMFO60524 1076 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 TSPAN9O75954 239 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ERLIN2O94905 339 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 PGM3O95394 542 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 FAM200BP0CF97 657 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 GCFC2P16383 781 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ARF4P18085 180 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 AADACP22760 399 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 GLRA2P23416 452 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 EDNRAP25101 427 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 OR1G1P47890 313 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 HNRNPA3P51991 378 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 VCPP55072 806 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ERVK-16P61578 105 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 TRAP1Q12931 704 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 CUL4AQ13619 759 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 SMC1AQ14683 1233 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 IGSF11Q5DX21 431 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 UTF1Q5T230 341 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 LEMD1Q68G75 181 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 OR4A47Q6IF82 309 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 MOXD1Q6UVY6 613 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 PRSS55Q6UWB4 352 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 OTUD6AQ7L8S5 288 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ZNF410Q86VK4 478 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 HSCBQ8IWL3 235 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 C4orf19Q8IY42 314 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 MINDY1Q8N5J2 469 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 OR4Q3Q8NH05 313 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 FAM71F1Q96KD3 344 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 CCDC43Q96MW1 224 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 MTMR9Q96QG7 549 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 PLIN2Q99541 437 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 HSD17B14Q9BPX1 270 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 TEX12Q9BXU0 123 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 DNAI2Q9GZS0 605 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 ZBP1Q9H171 429 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 POLR3FQ9H1D9 316 aaPredicted RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
SRRM1-219ENST00000495561 AGPAT5Q9NUQ2 364 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 MARCH5Q9NX47 278 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 PCDHGB4Q9UN71 923 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 SIP14410 1827 aa2.82□□□□□ -1.96
SRRM1-219ENST00000495561 MYH6P13533 1939 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 CASTOR2A6NHX0 329 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 E9PMD0 336 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 I3L4J1 428 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 ADAM12O43184 909 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 DKC1O60832 514 aaKnown RBP eCLIP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 N4BP1O75113 896 aaKnown RBP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 OR52Z1P0C646 297 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 IRF2P14316 349 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 DNASE1P24855 282 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 ARL2P36404 184 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 CCT6AP40227 531 aaKnown RBP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 MAPK12P53778 367 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 CDH13P55290 713 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 PTENP60484 403 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 OSTNP61366 133 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 HNRNPKP61978 463 aaKnown RBP eCLIP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 NTHL1P78549 312 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 SIX1Q15475 284 aaPredicted RBP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 IL17AQ16552 155 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 NTRK2Q16620 822 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 UPP1Q16831 310 aa2.81□□□□□ -1.96
SRRM1-219ENST00000495561 C15orf59Q2T9L4 293 aaPredicted RBP2.81□□□□□ -1.96
SRRM1-219ENST00000495561 HERC4Q5GLZ8 1057 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms