RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SHCBP1LQ9BZQ2 653 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 WWTR1Q9GZV5 400 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 TSPAN10Q9H1Z9 355 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-211ENST00000494800 EML4Q9HC35 981 aaKnown RBP16.33■□□□□ 0.2
HDAC4-211ENST00000494800 SACM1LQ9NTJ5 587 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 SUCOQ9UBS9 1254 aaKnown RBP16.33■□□□□ 0.2
HDAC4-211ENST00000494800 UTS2RQ9UKP6 389 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 CES1P1Q9UKY3 287 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 CFL2Q9Y281 166 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 DLGAP4Q9Y2H0 992 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 CAPN14A8MX76 684 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 ASNA1O43681 348 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 SLC19A2O60779 497 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 LDLRP01130 860 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 ATP1B1P05026 303 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 IL3P08700 152 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 ANXA4P09525 319 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-211ENST00000494800 GP1BBP13224 206 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 FOXA1P55317 472 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 NRG3P56975 720 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 GPR85P60893 370 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 PLGLB1Q02325 96 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 EBPQ15125 230 aaKnown RBP16.32■□□□□ 0.2
HDAC4-211ENST00000494800 C1QL3Q5VWW1 255 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 MTFR2Q6P444 385 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 SCIMPQ6UWF3 145 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 RGS9BPQ6ZS82 235 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 TRIM46Q7Z4K8 759 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 LRRC25Q8N386 305 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-211ENST00000494800 VWA5B2Q8N398 1253 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 ZFP62Q8NB50 900 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-211ENST00000494800 FAM76AQ8TAV0 307 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 DOK4Q8TEW6 326 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 APIPQ96GX9 242 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 BRINP2Q9C0B6 783 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 OR10A5Q9H207 317 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 SIRT5Q9NXA8 310 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 ENTPD4Q9Y227 616 aa16.32■□□□□ 0.2
HDAC4-211ENST00000494800 WIPF3A6NGB9 483 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 SLC28A1O00337 649 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 RGS16O15492 202 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 RGS14O43566 566 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 SPAG7O75391 227 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 RSL1D1O76021 490 aaKnown RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 ABOP16442 354 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 SSTR4P31391 388 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FEN1P39748 380 aaKnown RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 TMED10P49755 219 aaKnown RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF763Q0D2J5 394 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FUT7Q11130 342 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 ZNF750Q32MQ0 723 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 PAOXQ6QHF9 649 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FAM47EQ6ZV65 393 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 CROCCP2Q86T23 111 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FJX1Q86VR8 437 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 SIAH3Q8IW03 269 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 TCP10LQ8TDR4 215 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 C16orf78Q8WTQ4 265 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 RELTQ969Z4 430 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 TP53INP1Q96A56 240 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 SPACA9Q96E40 222 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 METTL2AQ96IZ6 378 aaKnown RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FAM173AQ9BQD7 235 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 GATA5Q9BWX5 397 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 EBPLQ9BY08 206 aa16.31■□□□□ 0.2
HDAC4-211ENST00000494800 WBP11Q9Y2W2 641 aaKnown RBP16.31■□□□□ 0.2
HDAC4-211ENST00000494800 FLNBO75369 2602 aaKnown RBP16.3■□□□□ 0.2
HDAC4-211ENST00000494800 A0A1W2PS29 197 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 AZIN1O14977 448 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 NPHS1O60500 1241 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 CNR1P21554 472 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 ALDH3A1P30838 453 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 RAE1P78406 368 aaKnown RBP16.3■□□□□ 0.2
HDAC4-211ENST00000494800 MAP4K2Q12851 820 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 FAM219BQ5XKK7 198 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 SLC22A10Q63ZE4 541 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 SLC22A16Q86VW1 577 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 MMP21Q8N119 569 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 EID3Q8N140 333 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 OR2M7Q8NG81 312 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 C16orf52Q8NHV5 167 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 CDC26Q8NHZ8 85 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 MIEF1Q9NQG6 463 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 EHD3Q9NZN3 535 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 BCAP29Q9UHQ4 241 aa16.3■□□□□ 0.2
HDAC4-211ENST00000494800 LRRK2Q5S007 2527 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 TP53I11O14683 189 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 SEC22BO75396 215 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 FBXO45P0C2W1 286 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CT62P0C5K7 136 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 ESRRAP11474 423 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 NEFHP12036 1026 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 SERPINB5P36952 375 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 RFC3P40938 356 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 CA7P43166 264 aa16.29■□□□□ 0.2
HDAC4-211ENST00000494800 NR0B1P51843 470 aaKnown RBP16.29■□□□□ 0.2
HDAC4-211ENST00000494800 RPP38P78345 283 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms