RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 GNLYP22749 145 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 PRPH2P23942 346 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 SSTR4P31391 388 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 MPP2Q14168 576 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 GALNTL6Q49A17 601 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 HLA-DQA1Q5Y7H0 255 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 IL20RBQ6UXL0 311 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 RNF165Q6ZSG1 346 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 GALNTL5Q7Z4T8 443 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 C9orf40Q8IXQ3 194 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 GPALPP1Q8IXQ4 340 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 SAMD14Q8IZD0 417 aaPredicted RBP14.78□□□□□ -0.04
LIME1-209ENST00000494776 LRRC25Q8N386 305 aaPredicted RBP14.78□□□□□ -0.04
LIME1-209ENST00000494776 NUBPLQ8TB37 319 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 SLC22A8Q8TCC7 542 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 SCMH1Q96GD3 660 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 RASL10BQ96S79 203 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 TRIM45Q9H8W5 580 aaPredicted RBP14.78□□□□□ -0.04
LIME1-209ENST00000494776 TIMMDC1Q9NPL8 285 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 NKIRAS1Q9NYS0 192 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 ZDHHC2Q9UIJ5 367 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 CCL27Q9Y4X3 112 aa14.78□□□□□ -0.04
LIME1-209ENST00000494776 TMEM120BA0PK00 339 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 LYPLA1O75608 230 aaPredicted RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 ATP1B1P05026 303 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 CT62P0C5K7 136 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 DHRS4L1P0CG22 281 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 DDCP20711 480 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 BGNP21810 368 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 GRK2P25098 689 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 SOX3P41225 446 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 UQCRFS1P47985 274 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 SLC37A1P57057 533 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 ABCE1P61221 599 aaKnown RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 RPL38P63173 70 aaKnown RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 MPEG1Q2M385 716 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 UGT3A2Q3SY77 523 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 OPN5Q6U736 354 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 Q6ZSR9 355 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 CCDC116Q8IYX3 515 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 VWA5B2Q8N398 1253 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 ADCY4Q8NFM4 1077 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 OR7G1Q8NGA0 311 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 OR6Y1Q8NGX8 325 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 OR2T11Q8NH01 316 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 DNAJB8Q8NHS0 232 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 MGARPQ8TDB4 240 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 CNRIP1Q96F85 164 aaPredicted RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 TAAR6Q96RI8 345 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 BBS4Q96RK4 519 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 MYNNQ9NPC7 610 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 EHD3Q9NZN3 535 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 BCAP29Q9UHQ4 241 aa14.77□□□□□ -0.05
LIME1-209ENST00000494776 WBP11Q9Y2W2 641 aaKnown RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 KLF13Q9Y2Y9 288 aaPredicted RBP14.77□□□□□ -0.05
LIME1-209ENST00000494776 CNTRLQ7Z7A1 2325 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 MYO18BQ8IUG5 2567 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 C2orf92A0A1B0GVN3 265 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 ANKUB1A6NFN9 424 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 LSM1O15116 133 aaKnown RBP14.76□□□□□ -0.05
LIME1-209ENST00000494776 ITM2AO43736 263 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 NME2P1O60361 137 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 SKAP2O75563 359 aaPredicted RBP14.76□□□□□ -0.05
LIME1-209ENST00000494776 OR6B1O95007 311 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 NME2P22392 152 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 ARRB2P32121 409 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 MPIP34949 423 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PTGER1P34995 402 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 SLC1A6P48664 564 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PMP22Q01453 160 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 FUT7Q11130 342 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 STX3Q13277 289 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 MRPL49Q13405 166 aaKnown RBP14.76□□□□□ -0.05
LIME1-209ENST00000494776 KIAA0040Q15053 153 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PRICKLE4Q2TBC4 344 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 ATP6AP1LQ52LC2 224 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PIGGQ5H8A4 983 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 FAM71E1Q6IPT2 247 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 FAM111BQ6SJ93 734 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 IKBIPQ70UQ0 350 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.76□□□□□ -0.05
LIME1-209ENST00000494776 TICAM1Q8IUC6 712 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 PPP3R2Q96LZ3 170 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 BARD1Q99728 777 aaKnown RBP14.76□□□□□ -0.05
LIME1-209ENST00000494776 CCT7Q99832 543 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 WWTR1Q9GZV5 400 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 OR10A5Q9H207 317 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 SLC35C2Q9NQQ7 365 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 TMED5Q9Y3A6 229 aa14.76□□□□□ -0.05
LIME1-209ENST00000494776 ASH1LQ9NR48 2969 aaKnown RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 NPIPB8E9PQR5 432 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 KLRC4-KLRK1H3BQV0 150 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 PEX11AO75192 247 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 SNUPNO95149 360 aaKnown RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 CBX6O95503 412 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 EDN3P14138 238 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 MAPK1P28482 360 aa14.75□□□□□ -0.05
LIME1-209ENST00000494776 ALDH6A1Q02252 535 aaKnown RBP14.75□□□□□ -0.05
LIME1-209ENST00000494776 DUSP2Q05923 314 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms