RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FGD2Q7Z6J4 655 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 SLC15A4Q8N697 577 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 GBP7Q8N8V2 638 aaPredicted RBP30.67■■■□□ 2.5
CBX4-203ENST00000494546 AGAP11Q8TF27 550 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 ITLN2Q8WWU7 325 aaPredicted RBP30.67■■■□□ 2.5
CBX4-203ENST00000494546 SPACA9Q96E40 222 aaPredicted RBP30.67■■■□□ 2.5
CBX4-203ENST00000494546 FAM173AQ9BQD7 235 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 FAIM2Q9BWQ8 316 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 DEFB127Q9H1M4 99 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 CES1P1Q9UKY3 287 aa30.67■■■□□ 2.5
CBX4-203ENST00000494546 A0A1B0GTH9 108 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 GOLGA6L10A6NI86 522 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 ACOT7O00154 380 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 PDE9AO76083 593 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 KRT4P19013 534 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 DNASE1L1P49184 302 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 VSNL1P62760 191 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 HMGCS1Q01581 520 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 ZNF791Q3KP31 576 aaPredicted RBP30.66■■■□□ 2.5
CBX4-203ENST00000494546 SCIMPQ6UWF3 145 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 LYPD8Q6UX82 237 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 MRGPRGQ86SM5 289 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 C4orf33Q8N1A6 199 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 OR2W6PQ8NHA6 318 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 TTTY12Q9BZ98 90 aa30.66■■■□□ 2.5
CBX4-203ENST00000494546 C2orf92A0A1B0GVN3 265 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 TLDC2A0PJX2 215 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 UBFD1O14562 309 aaKnown RBP30.65■■■□□ 2.5
CBX4-203ENST00000494546 PRRG2O14669 202 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 FEN1P39748 380 aaKnown RBP30.65■■■□□ 2.5
CBX4-203ENST00000494546 DCTP40126 519 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 NAGLUP54802 743 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 TRA2BP62995 288 aaKnown RBP30.65■■■□□ 2.5
CBX4-203ENST00000494546 HLA-DQA1Q5Y7H0 255 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 KLHL29Q96CT2 875 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 MCM8Q9UJA3 840 aa30.65■■■□□ 2.5
CBX4-203ENST00000494546 PTGS2P35354 604 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 FOXA1P55317 472 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 ACSM2AQ08AH3 577 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 FUT7Q11130 342 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 CFAP157Q5JU67 520 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 SLC22A10Q63ZE4 541 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 ACSM2BQ68CK6 577 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 RPTNQ6XPR3 784 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 SLC22A16Q86VW1 577 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 FAM13CQ8NE31 585 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 RDH11Q8TC12 318 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 APIPQ96GX9 242 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 BRINP2Q9C0B6 783 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 OR10A5Q9H207 317 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 PSME2Q9UL46 239 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 MEMO1Q9Y316 297 aa30.64■■■□□ 2.5
CBX4-203ENST00000494546 GNG14A0A1W2PPG7 69 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 PCDH7O60245 1069 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 FBXO45P0C2W1 286 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 CPA3P15088 417 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 CSNK2A2P19784 350 aaPredicted RBP30.63■■■□□ 2.49
CBX4-203ENST00000494546 PIGAP37287 484 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 NR0B1P51843 470 aaKnown RBP30.63■■■□□ 2.49
CBX4-203ENST00000494546 NAA20P61599 178 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 BTKQ06187 659 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 FAM180BQ6P0A1 224 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 C3P1Q6ZMU1 363 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 RGS9BPQ6ZS82 235 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 FRMD7Q6ZUT3 714 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 DOLPP1Q86YN1 238 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 TAGAPQ8N103 731 aa30.63■■■□□ 2.49
CBX4-203ENST00000494546 CRCPO75575 148 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 SERPINB3P29508 390 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 DNAJB13P59910 316 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 RAE1P78406 368 aaKnown RBP30.62■■■□□ 2.49
CBX4-203ENST00000494546 ADORA2A-AS1P86434 159 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 SPIN4Q56A73 249 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 TMEM64Q6YI46 380 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 DND1Q8IYX4 353 aaKnown RBP30.62■■■□□ 2.49
CBX4-203ENST00000494546 ZNF808Q8N4W9 903 aaPredicted RBP30.62■■■□□ 2.49
CBX4-203ENST00000494546 ZNF615Q8N8J6 731 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 OR7G1Q8NGA0 311 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 OR5M3Q8NGP4 307 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 PHF12Q96QT6 1004 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 SH2D2AQ9NP31 389 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 TUBA8Q9NY65 449 aaPredicted RBP30.62■■■□□ 2.49
CBX4-203ENST00000494546 HEY2Q9UBP5 337 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 DLGAP4Q9Y2H0 992 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 ZNF780BQ9Y6R6 833 aa30.62■■■□□ 2.49
CBX4-203ENST00000494546 PRSS44E7EML9 344 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 GLSO94925 669 aaPredicted RBP30.61■■■□□ 2.49
CBX4-203ENST00000494546 TPOP07202 933 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 IL3P08700 152 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 SLC18A2Q05940 514 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 PRAMEF20Q5VT98 475 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 PAOXQ6QHF9 649 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 FAM111BQ6SJ93 734 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 NCCRP1Q6ZVX7 275 aaPredicted RBP30.61■■■□□ 2.49
CBX4-203ENST00000494546 VWA5B2Q8N398 1253 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 OR10G3Q8NGC4 313 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 FAM57AQ8TBR7 257 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 PAQR8Q8TEZ7 354 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 IL1RL2Q9HB29 575 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 PFDN4Q9NQP4 134 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms