RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	ATP6V1G3	Q96LB4	118 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	PPP1R36	Q96LQ0	422 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF354B	Q96LW1	612 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF681	Q96N22	645 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	SIGLEC12	Q96PQ1	595 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	LRTM1	Q9HBL6	345 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	PNPO	Q9NVS9	261 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF446	Q9NWS9	450 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	C1orf109	Q9NX04	203 aa		10.83	□□□□□ -0.68
UBA3-211	ENST00000493957	TENM4	Q6N022	2769 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF407	Q9C0G0	2248 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	DYTN	A2CJ06	578 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	OR5H15	A6NDH6	313 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	TTLL8	A6PVC2	850 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	NPIPB8	E9PQR5	432 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	WWP2	O00308	870 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	RGS14	O43566	566 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	GUCY1B2	O75343	617 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	CHEK2	O96017	543 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	SLC35E2	P0CK97	266 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	NEFH	P12036	1026 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	COX7A2	P14406	83 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	SDC1	P18827	310 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	NT5E	P21589	574 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	HK2	P52789	917 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	RNF4	P78317	190 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	C2orf80	Q0P641	193 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	MGAT2	Q10469	447 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	DUSP8	Q13202	625 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	STX3	Q13277	289 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF169	Q14929	603 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	PDCD2	Q16342	344 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	SPRED3	Q2MJR0	410 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	FAM71E1	Q6IPT2	247 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	ANKRD26P1	Q6NSI1	321 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	FAM111B	Q6SJ93	734 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF227	Q86WZ6	799 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	CISD2	Q8N5K1	135 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	MDS2	Q8NDY4	140 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	ADCY4	Q8NFM4	1077 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	NUDT8	Q8WV74	236 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	HAS2	Q92819	552 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	RIT1	Q92963	219 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	GFM2	Q969S9	779 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	EXOSC8	Q96B26	276 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	RBM18	Q96H35	190 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	FBXL20	Q96IG2	436 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	FAIM2	Q9BWQ8	316 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	RNF32	Q9H0A6	362 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	CXorf21	Q9HAI6	301 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	MYNN	Q9NPC7	610 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	SLAMF7	Q9NQ25	335 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	BAIAP2L1	Q9UHR4	511 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	UTS2R	Q9UKP6	389 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	DNAJC13	O75165	2243 aa		10.82	□□□□□ -0.68
UBA3-211	ENST00000493957	PEX11A	O75192	247 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	NME6	O75414	186 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	ITGA10	O75578	1167 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	OR2J2	O76002	312 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	ZFAND5	O76080	213 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	LRAT	O95237	230 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	POR	P16435	677 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	S1PR1	P21453	382 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	SLC18A1	P54219	525 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	PMP22	Q01453	160 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	EXOSC7	Q15024	291 aa	Known RBP	10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	INPP5J	Q15735	1006 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	ZNF385B	Q569K4	471 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	SPINK14	Q6IE38	97 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	HSDL2	Q6YN16	418 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	TICAM1	Q8IUC6	712 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	LGI4	Q8N135	537 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	ARMC10	Q8N2F6	343 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	TSSK3	Q96PN8	268 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	C1orf50	Q9BV19	199 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	VIPAS39	Q9H9C1	493 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	ANKRA2	Q9H9E1	313 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	KLHL1	Q9NR64	748 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	NKIRAS1	Q9NYS0	192 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	MAT2B	Q9NZL9	334 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	TEKT2	Q9UIF3	430 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	RAP2C	Q9Y3L5	183 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	MYO18B	Q8IUG5	2567 aa		10.81	□□□□□ -0.68
UBA3-211	ENST00000493957	PCNX3	Q9H6A9	2034 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	SYNDIG1L	A6NDD5	238 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	AKAP10	O43572	662 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	PRAMEF2	O60811	474 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	SNN	O75324	88 aa	Predicted RBP	10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	NEURL1	O76050	574 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	BCKDHA	P12694	445 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	DRD2	P14416	443 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	PCSK2	P16519	638 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	CSNK2A2	P19784	350 aa	Predicted RBP	10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	DDC	P20711	480 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	GRK2	P25098	689 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	GALNS	P34059	522 aa		10.8	□□□□□ -0.68
UBA3-211	ENST00000493957	SOX3	P41225	446 aa		10.8	□□□□□ -0.68

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