RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 RNF44Q7L0R7 432 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 ARHGAP22Q7Z5H3 698 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 VN1R4Q7Z5H5 301 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 TBC1D19Q8N5T2 526 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 GBP7Q8N8V2 638 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 OR4D9Q8NGE8 314 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 CEP70Q8NHQ1 597 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 Q8TCH9 128 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SLC13A3Q8WWT9 602 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 STON2Q8WXE9 905 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 RAB24Q969Q5 203 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 TUBGCP3Q96CW5 907 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 TM4SF19Q96DZ7 209 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 CMTM7Q96FZ5 175 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 APIPQ96GX9 242 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 MAELQ96JY0 434 aaKnown RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 MARK4Q96L34 752 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 GFM1Q96RP9 751 aaKnown RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 CD180Q99467 661 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 CCT7Q99832 543 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SIKE1Q9BRV8 207 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 MS4A8Q9BY19 250 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 MRPL1Q9BYD6 325 aaKnown RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SPRTNQ9H040 489 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 BRF2Q9HAW0 419 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 LRTM1Q9HBL6 345 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 PFDN4Q9NQP4 134 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 LANCL2Q9NS86 450 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 STARD5Q9NSY2 213 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SEMA5BQ9P283 1151 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 PDP2Q9P2J9 529 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 VPS29Q9UBQ0 182 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 ST6GALNAC2Q9UJ37 374 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SLC12A4Q9UP95 1085 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 SCN3AQ9NY46 2000 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 WDFY3Q8IZQ1 3526 aa6.21□□□□□ -1.42
TRA2B-216ENST00000493864 MN1Q10571 1320 aaPredicted RBP6.21□□□□□ -1.42
TRA2B-216ENST00000493864 USP24Q9UPU5 2620 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 A0A0G2JN53 185 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 LRIT2A6NDA9 550 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 C4orf51C9J302 202 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 RTCAO00442 366 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 FCHO1O14526 889 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SLC30A4O14863 429 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 P2RX6O15547 441 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 VPS4BO75351 444 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 GP1BAP07359 652 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SERPINA6P08185 405 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 PRR35P0CG20 571 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 HSD3B1P14060 373 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 FOLR1P15328 257 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 CD1EP15812 388 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 NELFEP18615 380 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SERPINB1P30740 379 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 HNRNPH1P31943 449 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 DIO3P55073 304 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 CLDN6P56747 220 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 RAE1P78406 368 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 HSD11B2P80365 405 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 EMX2Q04743 252 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 GABPB1Q06547 395 aaPredicted RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 CUL3Q13618 768 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 NAA25Q14CX7 972 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 KIAA0040Q15053 153 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 TRIP6Q15654 476 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 ELAVL1Q15717 326 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 HKDC1Q2TB90 917 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 ATP6AP1LQ52LC2 224 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 TOR1AIP1Q5JTV8 583 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 WASHC2DQ5SRD0 308 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 C10orf62Q5T681 223 aaPredicted RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 IL23RQ5VWK5 629 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 KHDRBS2Q5VWX1 349 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 NOXRED1Q6NXP6 359 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 PRSS42Q7Z5A4 293 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SPATA19Q7Z5L4 167 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 ASPGQ86U10 573 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 ZFAND4Q86XD8 727 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 CACNA2D3Q8IZS8 1091 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 METTL4Q8N3J2 472 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 C1orf52Q8N6N3 182 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 AMER3Q8N944 861 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 DEFB124Q8NES8 71 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 TRPV3Q8NET8 790 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 TTLQ8NG68 377 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 NT5CQ8TCD5 201 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 RGMAQ96B86 450 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SLC41A2Q96JW4 573 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 PPP3R2Q96LZ3 170 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 LRGUKQ96M69 825 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 CATSPER2Q96P56 530 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SERPINI1Q99574 410 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 C1orf50Q9BV19 199 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SORBS1Q9BX66 1292 aaKnown RBP6.2□□□□□ -1.42
TRA2B-216ENST00000493864 PDE7BQ9NP56 450 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SAR1AQ9NR31 198 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 NMRK1Q9NWW6 199 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 C1orf109Q9NX04 203 aa6.2□□□□□ -1.42
TRA2B-216ENST00000493864 SOHLH2Q9NX45 425 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms