RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ZNF225Q9UK10 706 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 CES1P1Q9UKY3 287 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ANGPTL3Q9Y5C1 460 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 LIPGQ9Y5X9 500 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 C2CD3Q4AC94 2353 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 A0A0G2JNJ9 132 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 IQANK1A0A1B0GTG1 560 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 A0A1W2PS29 197 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 GLOD5A6NK44 160 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 FIGNL2A6NMB9 653 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 NPIPA2E9PIF3 369 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 NPIPA3F8WFD2 350 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 G3V3Y1 287 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 DYRK3O43781 588 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 WDR1O75083 606 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CNTFP26441 200 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SERPINB3P29508 390 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SERPINB9P50453 376 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 HERVK_113P63132 956 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ERVK-8P63133 956 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 PHEXP78562 749 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 PLGLB1Q02325 96 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 GALNT1Q10472 559 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 DDX39BQ13838 428 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF267Q14586 743 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 TSNAXIP1Q2TAA8 658 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 GLE1Q53GS7 698 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 TBCELQ5QJ74 424 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 FNDC7Q5VTL7 733 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 OR52E8Q6IFG1 317 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM81Q6P7N7 255 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SPNS3Q6ZMD2 512 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 MEX3BQ6ZN04 569 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 TIFABQ6ZNK6 161 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CCDC71Q8IV32 467 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 PTGR2Q8N8N7 351 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 NOA1Q8NC60 698 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 OR7G1Q8NGA0 311 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 OR10G3Q8NGC4 313 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF483Q8TF39 744 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SARAFQ96BY9 339 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CTHRC1Q96CG8 243 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 NSUN5Q96P11 429 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CDK15Q96Q40 435 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 PAFAH2Q99487 392 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 MRPL57Q9BQC6 102 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ERVK-6Q9BXR3 956 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ANGPTL4Q9BY76 406 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 UCK2Q9BZX2 261 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CDC42EP4Q9H3Q1 356 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 KCNJ16Q9NPI9 418 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 TEX10Q9NXF1 929 aaPredicted RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 CPSF2Q9P2I0 782 aaKnown RBP7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SPRR3Q9UBC9 169 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 Q9UFV3 132 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 ERVK-19Q9WJR5 959 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 PCDHA9Q9Y5H5 950 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 DOCK7Q96N67 2140 aa7.7□□□□□ -1.18
SMARCB1-207ENST00000491967 SETD2Q9BYW2 2564 aaPredicted RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ITPR3Q14573 2671 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 TRGV5A0A0B4J1U4 118 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 C2orf92A0A1B0GVN3 265 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ATP6AP2A0A1C7CYW4 349 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM221AA4D161 298 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 FOXO6A8MYZ6 492 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 PPP6CO00743 305 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ATP6AP2O75787 350 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SNX4O95219 450 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ATP1B1P05026 303 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 CT62P0C5K7 136 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 CPMP14384 443 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 NAGAP17050 411 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 GCAP28676 217 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SSTR4P31391 388 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ADH7P40394 386 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 MAN2A2P49641 1150 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 TRA2BP62995 288 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 MAP4K2Q12851 820 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 PRICKLE4Q2TBC4 344 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 NHSL2Q5HYW2 709 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 RIPPLY2Q5TAB7 128 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC48A1Q6P1K1 146 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 LETMD1Q6P1Q0 360 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 POMZP3Q6PJE2 187 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 CYP20A1Q6UW02 462 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 B3GNT6Q6ZMB0 384 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 RNF111Q6ZNA4 994 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SEM1Q6ZVN7 128 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC29A4Q7RTT9 530 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 LCA5Q86VQ0 697 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 MYLK4Q86YV6 388 aaPredicted RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 LIX1LQ8IVB5 337 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 TAGAPQ8N103 731 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 OR4K14Q8NGD5 310 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 NEIL3Q8TAT5 605 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 SPPL2AQ8TCT8 520 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 TM4SF18Q96CE8 201 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 MRRFQ96E11 262 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 PHF21BQ96EK2 531 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms