RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 FOXE1O00358 373 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 CCL21O00585 134 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 FCHO1O14526 889 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 TMPRSS11DO60235 418 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ZFAND5O76080 213 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 OR6B1O95007 311 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 PDYNP01213 254 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 IFNA16P05015 189 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 FGF4P08620 206 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 GRNP28799 593 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 PTGER1P34995 402 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 BSGP35613 385 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SSR2P43308 183 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 RPL14P50914 215 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 HK2P52789 917 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 FOXA1P55317 472 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ADORA2A-AS1P86434 159 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 STX4Q12846 297 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 CDSNQ15517 529 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 KRTCAP3Q53RY4 240 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SPDYAQ5MJ70 313 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 CES4AQ5XG92 561 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 MRM1Q6IN84 353 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SCIMPQ6UWF3 145 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 Q6ZPB1 254 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 TMEM132CQ8N3T6 1108 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ZCCHC7Q8N3Z6 543 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF781Q8N8C0 355 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 GBP7Q8N8V2 638 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 MORN4Q8NDC4 146 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SLC2A12Q8TD20 617 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF721Q8TF20 911 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 RGMAQ96B86 450 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 HBEGFQ99075 208 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SERPINI1Q99574 410 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 FARSBQ9NSD9 589 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 MYOTQ9UBF9 498 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 SLC12A4Q9UP95 1085 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 YARS2Q9Y2Z4 477 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 ASB4Q9Y574 426 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 CLCA3PQ9Y6N3 262 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.53
SEC61A1-206ENST00000491668 A0A1W2PR48 441 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 C17orf105B2RV13 164 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 TMEM233B4DJY2 109 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 WWP2O00308 870 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 ADAM10O14672 748 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 PROM1O43490 865 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 PEX1O43933 1283 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 SNNO75324 88 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 SKAP2O75563 359 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 KITP10721 976 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 HSD3B1P14060 373 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF24P17028 368 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 CPN2P22792 545 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 HSD3B2P26439 372 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 SOX3P41225 446 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 MEOX1P50221 254 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 GPR85P60893 370 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 RNF4P78317 190 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 GUCY1A3Q02108 690 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.76□□□□□ -0.539e-9■□□□□ 10
SEC61A1-206ENST00000491668 KANK2Q63ZY3 851 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 HSDL2Q6YN16 418 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 FAM47EQ6ZV65 393 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 NCCRP1Q6ZVX7 275 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 GPR180Q86V85 440 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 SPPL2CQ8IUH8 684 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 CYP4Z2PQ8N1L4 340 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 TMEM156Q8N614 296 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 C16orf52Q8NHV5 167 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 DOK4Q8TEW6 326 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 TWIST2Q8WVJ9 160 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 PPWD1Q96BP3 646 aaKnown RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 RASL10BQ96S79 203 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 SORT1Q99523 831 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 C20orf27Q9GZN8 174 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 DDX31Q9H8H2 851 aaKnown RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 BRF2Q9HAW0 419 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 TNFRSF12AQ9NP84 129 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 AHSPQ9NZD4 102 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 MARCOQ9UEW3 520 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 HRH3Q9Y5N1 445 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
SEC61A1-206ENST00000491668 A0A1W2PS29 197 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 SLCO1B7G3V0H7 640 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 SLC28A1O00337 649 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 PIP5K1BO14986 540 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 RGS14O43566 566 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 LINC00032P0C843 101 aa11.75□□□□□ -0.53
SEC61A1-206ENST00000491668 ARRB2P32121 409 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms