RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 H0YIV9 168 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 FCHO1O14526 889 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CDC40O60508 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 NME6O75414 186 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 LRATO95237 230 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CLDN9O95484 217 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 KLK1P06870 262 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 INHBAP08476 426 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CELA3AP09093 270 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CCL3P10147 92 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 MYBL2P10244 700 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CHN1P15882 459 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 ZNF10P21506 573 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PTX3P26022 381 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PIGAP37287 484 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 KIR3DL1P43629 444 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 STT3AP46977 705 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 DNASE1L1P49184 302 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 SSR4P51571 173 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PER3P56645 1201 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 IGLV3-21P80748 117 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 DUSP2Q05923 314 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TGM3Q08188 693 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 ILF2Q12905 390 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TRAF3Q13114 568 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 ZNF267Q14586 743 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 OCLNQ16625 522 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 SWI5Q1ZZU3 235 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TMEM35AQ53FP2 167 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 UNC50Q53HI1 259 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PIGGQ5H8A4 983 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 EMC4Q5J8M3 183 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TCHHL1Q5QJ38 904 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 FAM180BQ6P0A1 224 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 HSDL2Q6YN16 418 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 GPR180Q86V85 440 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 C9orf40Q8IXQ3 194 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 GSPT2Q8IYD1 628 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 MARVELD2Q8N4S9 558 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 MORN4Q8NDC4 146 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 SIMC1Q8NDZ2 872 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 SRFBP1Q8NEF9 429 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 OR2M7Q8NG81 312 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 OR4F6Q8NGB9 312 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 AGAP11Q8TF27 550 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 UBE2E3Q969T4 207 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 ISL2Q96A47 359 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 CCDC77Q9BR77 488 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 TRIM8Q9BZR9 551 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 EPB41L4BQ9H329 900 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 DDX31Q9H8H2 851 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PROK2Q9HC23 129 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 XPR1Q9UBH6 696 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 PCTPQ9UKL6 214 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 ERVK-11Q9UQG0 969 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 MRPS33Q9Y291 106 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 MEMO1Q9Y316 297 aa6.76□□□□□ -1.33
PRPF4B-208ENST00000490653 A0A1W2PPM1 405 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 SYCE1LA8MT33 242 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 A8MT66 165 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 A8MVJ9 347 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 GOLGA8RI6L899 631 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 HNRNPRO43390 633 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 DLX3O60479 287 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 OR4F21O95013 312 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 GPR75O95800 540 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 AIFM1O95831 613 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 PDYNP01213 254 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 IGKV3-11P04433 115 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 RHOXF2BP0C7M4 288 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 RFPL3SP0C7P2 107 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 FAM58BPP0C7Q3 252 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ALOX15P16050 662 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ZNF24P17028 368 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 CNR1P21554 472 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 HTR1EP28566 365 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 PHBP35232 272 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 PIK3CBP42338 1070 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 CCNG1P51959 295 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 RAP1GDS1P52306 607 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 PPIAP62937 165 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 HERVK_113P63132 956 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ERVK-8P63133 956 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 TNFRSF17Q02223 184 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 RBPJQ06330 500 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ART3Q13508 389 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 SERTAD2Q14140 314 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 TERF2Q15554 542 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 ZNF630Q2M218 657 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 FAM111BQ6SJ93 734 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 SCIMPQ6UWF3 145 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 CEP128Q6ZU80 1094 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 MILR1Q7Z6M3 343 aa6.75□□□□□ -1.33
PRPF4B-208ENST00000490653 GHDCQ8N2G8 530 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms