RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 WASHC1A8K0Z3 465 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 B2RBV5 119 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 TGFBR3LH3BV60 316 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 TERTO14746 1132 aaKnown RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 EMC8O43402 210 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 PLOD3O60568 738 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 CNOT3O75175 753 aaKnown RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 COQ9O75208 318 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 T-ENOLP0DO92 83 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 MMP11P24347 488 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 SOAT1P35610 550 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 ZNF750Q32MQ0 723 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 ZNF628Q5EBL2 1059 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 ZNF621Q6ZSS3 439 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 ANKRD37Q7Z713 158 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 LAPTM4BQ86VI4 370 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 RAB43Q86YS6 212 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 MORN4Q8NDC4 146 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 OR7G1Q8NGA0 311 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 OR9A2Q8NGT5 310 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 LRRC58Q96CX6 371 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 CGREF1Q99674 301 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 GPN2Q9H9Y4 310 aaPredicted RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 CXorf21Q9HAI6 301 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 PNO1Q9NRX1 252 aaKnown RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 NTMQ9P121 344 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 MAP10Q9P2G4 905 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
SNX12-205ENST00000490561 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 CLCA3PQ9Y6N3 262 aa12.39□□□□□ -0.43
SNX12-205ENST00000490561 KNTC1P50748 2209 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 A0A1W2PQ72 361 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 EVPLLA8MZ36 301 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SOX30O94993 753 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 UMODP07911 640 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 ABCB1P08183 1280 aaPredicted RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 ADRB1P08588 477 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CD1EP15812 388 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 CPA2P48052 419 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CCT3P49368 545 aaKnown RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 ANXA11P50995 505 aaKnown RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 VAC14Q08AM6 782 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 PRICKLE4Q2TBC4 344 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SPATS1Q496A3 300 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 SFT2D3Q587I9 215 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 FAM180BQ6P0A1 224 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 DLEU7Q6UYE1 221 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CPEB2Q7Z5Q1 589 aaKnown RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 TMEM151BQ8IW70 566 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 PGAM4Q8N0Y7 254 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 VWA5B2Q8N398 1253 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 OR8J3Q8NGG0 315 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 FGF11Q92914 225 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 LPAR4Q99677 370 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SLC35A5Q9BS91 424 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 INPP5KQ9BT40 448 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CXorf36Q9H7Y0 433 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SIRT3Q9NTG7 399 aaPredicted RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 DDX18Q9NVP1 670 aaKnown RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 C19orf53Q9UNZ5 99 aaPredicted RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 PCDHB14Q9Y5E9 798 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 SNX8Q9Y5X2 465 aa12.38□□□□□ -0.43
SNX12-205ENST00000490561 CNOT1A5YKK6 2376 aaKnown RBP12.38□□□□□ -0.43
SNX12-205ENST00000490561 TRBV5-3A0A0A0MS03 114 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 RNF103-CHMP3A0A140T963 221 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 LOC101059948A0A1B0GTJ6 334 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 SAGE2PA6NJ88 616 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 TTC36A6NLP5 189 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 PRAMEF2O60811 474 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 DNAJA2O60884 412 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 HOXB9P17482 250 aaPredicted RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 EFNA1P20827 205 aaPredicted RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 PTPN6P29350 595 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 MC3RP41968 323 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 CDK9P50750 372 aaKnown RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 AP2B1P63010 937 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 DUSP2Q05923 314 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 RUNDC3AQ59EK9 446 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 ZCCHC12Q6PEW1 402 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 TMEM107Q6UX40 140 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 OR2L13Q8N349 312 aa12.37□□□□□ -0.43
SNX12-205ENST00000490561 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
SNX12-205ENST00000490561 CTHRC1Q96CG8 243 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms