RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 P04436 131 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 CT62P0C5K7 136 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 CCL3P10147 92 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 ESRRAP11474 423 aaPredicted RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 PORP16435 677 aaPredicted RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 CNR1P21554 472 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 CRHR1P34998 444 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 DEKP35659 375 aaKnown RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 NAA20P61599 178 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 LYPD8Q6UX82 237 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 RPTNQ6XPR3 784 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 FAM47EQ6ZV65 393 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 FGD2Q7Z6J4 655 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 DND1Q8IYX4 353 aaKnown RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 C4orf33Q8N1A6 199 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 RDH11Q8TC12 318 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 CHTF18Q8WVB6 975 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 ITLN2Q8WWU7 325 aaPredicted RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 KLHL29Q96CT2 875 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 TTTY12Q9BZ98 90 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 RYDENQ9NUL5 291 aaKnown RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 MAST4O15021 2626 aa18.24■□□□□ 0.51
SMC4-222ENST00000490207 NCOA6Q14686 2063 aaPredicted RBP18.24■□□□□ 0.51
SMC4-222ENST00000490207 FAM166BA8MTA8 275 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 PRRG2O14669 202 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 PCDH7O60245 1069 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 ERAL1O75616 437 aaKnown RBP18.23■□□□□ 0.51
SMC4-222ENST00000490207 KRT4P19013 534 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 ALDH9A1P49189 494 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 PPIAP62937 165 aaKnown RBP18.23■□□□□ 0.51
SMC4-222ENST00000490207 HMGCS1Q01581 520 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 FUT7Q11130 342 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 ZNF791Q3KP31 576 aaPredicted RBP18.23■□□□□ 0.51
SMC4-222ENST00000490207 SPIN4Q56A73 249 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 ZNF787Q6DD87 383 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 FRMD7Q6ZUT3 714 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 SLC22A16Q86VW1 577 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 ZNF808Q8N4W9 903 aaPredicted RBP18.23■□□□□ 0.51
SMC4-222ENST00000490207 OR52N2Q8NGI0 321 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 OR2W6PQ8NHA6 318 aa18.23■□□□□ 0.51
SMC4-222ENST00000490207 C12orf65Q9H3J6 166 aaKnown RBP18.23■□□□□ 0.51
SMC4-222ENST00000490207 A0A1B0GTH9 108 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 C2orf92A0A1B0GVN3 265 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 UBFD1O14562 309 aaKnown RBP18.22■□□□□ 0.51
SMC4-222ENST00000490207 FBXO45P0C2W1 286 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 TIA1P31483 386 aaKnown RBP eCLIP18.22■□□□□ 0.511e-7■■■□□ 16.3
SMC4-222ENST00000490207 PTGS2P35354 604 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 FEN1P39748 380 aaKnown RBP18.22■□□□□ 0.51
SMC4-222ENST00000490207 DCTP40126 519 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 DNASE1L1P49184 302 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 NAGLUP54802 743 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 FOXA1P55317 472 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 DNAJB13P59910 316 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 RAE1P78406 368 aaKnown RBP18.22■□□□□ 0.51
SMC4-222ENST00000490207 ADORA2A-AS1P86434 159 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 ACSM2AQ08AH3 577 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 CFAP157Q5JU67 520 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 HLA-DQA1Q5Y7H0 255 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 ACSM2BQ68CK6 577 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 RGS9BPQ6ZS82 235 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 MRGPRGQ86SM5 289 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 TAGAPQ8N103 731 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 RIBC1Q8N443 379 aaPredicted RBP18.22■□□□□ 0.51
SMC4-222ENST00000490207 ZNF441Q8N8Z8 693 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 FAM13CQ8NE31 585 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 APIPQ96GX9 242 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 BRINP2Q9C0B6 783 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 DEFB127Q9H1M4 99 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 OR10A5Q9H207 317 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 SH2D2AQ9NP31 389 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 PLSCR2Q9NRY7 297 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 MID2Q9UJV3 735 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 PSME2Q9UL46 239 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 MEMO1Q9Y316 297 aa18.22■□□□□ 0.51
SMC4-222ENST00000490207 GNG14A0A1W2PPG7 69 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 TLDC2A0PJX2 215 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 SERTM1A2A2V5 107 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 H3BQF6 201 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 CRCPO75575 148 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 GLSO94925 669 aaPredicted RBP18.21■□□□□ 0.51
SMC4-222ENST00000490207 ATP1B1P05026 303 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 TPOP07202 933 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 IL3P08700 152 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 NUDT17P0C025 328 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 CPA3P15088 417 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 CSNK2A2P19784 350 aaPredicted RBP18.21■□□□□ 0.51
SMC4-222ENST00000490207 SERPINB3P29508 390 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 NR0B1P51843 470 aaKnown RBP18.21■□□□□ 0.51
SMC4-222ENST00000490207 SLC18A2Q05940 514 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 SLC22A10Q63ZE4 541 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 PAOXQ6QHF9 649 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 SCIMPQ6UWF3 145 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 CD163Q86VB7 1156 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 VWA5B2Q8N398 1253 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 FBXW8Q8N3Y1 598 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 ZNF615Q8N8J6 731 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 OR7G1Q8NGA0 311 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 OR10G3Q8NGC4 313 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 FAM57AQ8TBR7 257 aa18.21■□□□□ 0.51
SMC4-222ENST00000490207 PAQR8Q8TEZ7 354 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms