RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 Q9HAA7 133 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 AMBNQ9NP70 447 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 SLC7A10Q9NS82 523 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 ABCC13Q9NSE7 274 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 SEC14L4Q9UDX3 406 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 TRMT6Q9UJA5 497 aaKnown RBP4.44□□□□□ -1.7
VPS26A-206ENST00000489794 KNSTRNQ9Y448 316 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 SMAD5-AS1Q9Y6J3 95 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 AFF2P51816 1311 aa4.44□□□□□ -1.7
VPS26A-206ENST00000489794 NOTCH3Q9UM47 2321 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 AGRNO00468 2067 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 SEMA4FO95754 770 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 HMOX1P09601 288 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 P4HA1P13674 534 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 TNFRSF4P43489 277 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 NUMBP49757 651 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 NT5C2P49902 561 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 CBX3Q13185 183 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 LASP1Q14847 261 aaKnown RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 EXOSC7Q15024 291 aaKnown RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 CCL14Q16627 93 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 ANKRD55Q3KP44 614 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 GPAT3Q53EU6 434 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 SPINK14Q6IE38 97 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 CWC27Q6UX04 472 aaKnown RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 CCDC71Q8IV32 467 aaPredicted RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 SFRP1Q8N474 314 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 OR4Q3Q8NH05 313 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 OR4F5Q8NH21 305 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 FLVCR1-AS1Q8TAF5 88 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 U2AF1L4Q8WU68 220 aaKnown RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 MRPL53Q96EL3 112 aaKnown RBP4.43□□□□□ -1.7
VPS26A-206ENST00000489794 PRAM1Q96QH2 718 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 DCTPP1Q9H773 170 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 KCNMB3Q9NPA1 279 aa4.43□□□□□ -1.7
VPS26A-206ENST00000489794 SH3PXD2BA1X283 911 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 E9PAM4 449 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 MELTFP08582 738 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 ABHD2P08910 425 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 CCDC159P0C7I6 412 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 BRCC3P46736 316 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 CNN1P51911 297 aaKnown RBP4.42□□□□□ -1.7
VPS26A-206ENST00000489794 GFPT1Q06210 699 aaPredicted RBP4.42□□□□□ -1.7
VPS26A-206ENST00000489794 SLC25A30Q5SVS4 291 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 DLEU7Q6UYE1 221 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 SUMF1Q8NBK3 374 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 ITLN1Q8WWA0 313 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 COG3Q96JB2 828 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 ZNF560Q96MR9 790 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 DDX47Q9H0S4 455 aaKnown RBP4.42□□□□□ -1.7
VPS26A-206ENST00000489794 ABCG4Q9H172 646 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 DBNDD1Q9H9R9 158 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 SLC25A19Q9HC21 320 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 HOMER3Q9NSC5 361 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 CLEC5AQ9NY25 188 aa4.42□□□□□ -1.7
VPS26A-206ENST00000489794 RALGAPA1Q6GYQ0 2036 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 NPIPA5A0A0B4J1W7 369 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 MACROD2A1Z1Q3 448 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 NPIPA5E9PKD4 350 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 E2F3O00716 465 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 MCF2LO15068 1137 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 FAM200BP0CF97 657 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 ZNF131P52739 623 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
VPS26A-206ENST00000489794 HFEQ30201 348 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 NHLRC3Q5JS37 347 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 RNLSQ5VYX0 342 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 ZNF774Q6NX45 483 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 MOB2Q70IA6 237 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 CEACAM19Q7Z692 300 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 SLC22A16Q86VW1 577 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 AGAP11Q8TF27 550 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 ZNF346Q9UL40 294 aaKnown RBP4.41□□□□□ -1.7
VPS26A-206ENST00000489794 ENTPD4Q9Y227 616 aa4.41□□□□□ -1.7
VPS26A-206ENST00000489794 SPAG9O60271 1321 aaKnown RBP4.41□□□□□ -1.7
VPS26A-206ENST00000489794 A0A0A6YYD4 124 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 SLC9B1P1A6NJY1 282 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 TLR4O00206 839 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 REC8O95072 547 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 NUDT14O95848 222 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 GSTA1P08263 222 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 MATKP42679 507 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 SLC7A2P52569 658 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 ZNF239Q16600 458 aaKnown RBP4.4□□□□□ -1.71
VPS26A-206ENST00000489794 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 EPC2Q52LR7 807 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 EIPR1Q53HC9 387 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 UNC50Q53HI1 259 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 WDR25Q64LD2 544 aaPredicted RBP4.4□□□□□ -1.71
VPS26A-206ENST00000489794 LEMD1Q68G75 181 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 STEAP1BQ6NZ63 245 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 RFWD3Q6PCD5 774 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 REG3GQ6UW15 175 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 BAIAP2L2Q6UXY1 529 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 ADCK1Q86TW2 530 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 BATF2Q8N1L9 274 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 EXOC6Q8TAG9 804 aa4.4□□□□□ -1.71
VPS26A-206ENST00000489794 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms