RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 TRBV5-4A0A0C4DH59 114 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 SH3PXD2BA1X283 911 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CCDC69A6NI79 296 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 TLR4O00206 839 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CHEK1O14757 476 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DUSP11O75319 330 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 IGHV3-13P01766 116 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 SLC1A4P43007 532 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 ACADSBP45954 432 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CNN1P51911 297 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 HSPA14Q0VDF9 509 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 P2RY14Q15391 338 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 TEX35Q5T0J7 233 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 Q6ZRG5 221 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 RPAINQ86UA6 219 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 Q8N377 158 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 PARP8Q8N3A8 854 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 RTL3Q8N8U3 475 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DTD2Q96FN9 168 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 C16orf58Q96GQ5 468 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CDHR1Q96JP9 859 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 SPATA13Q96N96 652 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 RUNDC3BQ96NL0 473 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 LRRCC1Q9C099 1032 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DDX47Q9H0S4 455 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 TRPV6Q9H1D0 765 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CXXC4Q9H2H0 198 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DPEP3Q9H4B8 488 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DBNDD1Q9H9R9 158 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 VPS54Q9P1Q0 977 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 ERVK-18Q9QC07 812 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 KLK13Q9UKR3 277 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 RARRES3Q9UL19 164 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 MRPS2Q9Y399 296 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 STRAPQ9Y3F4 350 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CDK13Q14004 1512 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DIP2AQ14689 1571 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 NOTCH1P46531 2555 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 CELSR3Q9NYQ7 3312 aa2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 DHX29Q7Z478 1369 aaKnown RBP2.86□□□□□ -1.95
AC055855.1-201ENST00000489563 FANCD2Q9BXW9 1451 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PCNX3Q9H6A9 2034 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 C5orf42Q9H799 3197 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 EFCAB6Q5THR3 1501 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CENPFP49454 3210 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 MACROD2A1Z1Q3 448 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ZNF724A8MTY0 619 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 K7EQG2 157 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PI15O43692 258 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CRLF1O75462 422 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 OR6B1O95007 311 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 MT-ND3P03897 115 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SERPINF2P08697 491 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ABHD2P08910 425 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 KRT5P13647 590 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 LMO2P25791 158 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SHC1P29353 583 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 MARCKSP29966 332 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SPRP35270 261 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ETV5P41161 510 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 MTIF2P46199 727 aaKnown RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PITPNBP48739 271 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 LIMK2P53671 638 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 GSTO1P78417 241 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CCZ1BP86790 482 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CCZ1P86791 482 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CDKL1Q00532 357 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ACY1Q03154 408 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ITPK1Q13572 414 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SIX1Q15475 284 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 CARTPTQ16568 116 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 POM121L1PQ3SYA9 428 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 GPAT3Q53EU6 434 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 FAM182AQ5T1J6 154 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PRAMEF7Q5VXH5 474 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 NKAIN2Q5VXU1 208 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 HIST2H2AA3Q6FI13 130 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 FBXL22Q6P050 247 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ZNF841Q6ZN19 808 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PHC2Q8IXK0 858 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ZNF781Q8N8C0 355 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SAMD12Q8N8I0 201 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 C4orf32Q8N8J7 132 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ARL10Q8N8L6 244 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 LEMD2Q8NC56 503 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SLCO4A1Q96BD0 722 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 RAB39BQ96DA2 213 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 GPR137Q96N19 417 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PSMB7Q99436 277 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 ZNF577Q9BSK1 485 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 RBM24Q9BX46 236 aaKnown RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 TRIM6Q9C030 488 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 LIME1Q9H400 295 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 NT5DC2Q9H857 520 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 SLC25A19Q9HC21 320 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 KCNMB3Q9NPA1 279 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 PRMT8Q9NR22 394 aaPredicted RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 EIF3KQ9UBQ5 218 aaKnown RBP2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 COPS7AQ9UBW8 275 aa2.85□□□□□ -1.95
AC055855.1-201ENST00000489563 FETUBQ9UGM5 382 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms