RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 OR6C74A6NCV1 312 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SSX5O60225 188 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 TUBG1P23258 451 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 CDNFQ49AH0 187 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 THAP3Q8WTV1 239 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SCRN2Q96FV2 425 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 OR2B2Q9GZK3 357 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 OR10A4Q9H209 315 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SPHK2Q9NRA0 654 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF226Q9NYT6 803 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 ACSL5Q9ULC5 683 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 NTRK2Q16620 822 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 FAM214AQ32MH5 1076 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 ARSKQ6UWY0 536 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 CYS1Q717R9 158 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SUN3Q8TAQ9 357 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 PEX13Q92968 403 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 CLEC4EQ9ULY5 219 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 A0A1W2PP55 124 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 F5H0A9 414 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-209ENST00000489180 RBMXP38159 391 aaKnown RBP16.83■□□□□ 0.28
NPHP4-209ENST00000489180 HTR2BP41595 481 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 RIN1Q13671 783 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SLC29A1Q99808 456 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 PPIL3Q9H2H8 161 aaKnown RBP16.83■□□□□ 0.28
NPHP4-209ENST00000489180 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 SLC45A1Q9Y2W3 748 aa16.83■□□□□ 0.28
NPHP4-209ENST00000489180 LMO7Q8WWI1 1683 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 H7C2Y5 167 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 ADH1BP00325 375 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 H2BFMP0C1H6 154 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF791Q3KP31 576 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 CHRFAM7AQ494W8 412 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 NXPE4Q6UWF7 544 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 OR13J1Q8NGT2 312 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 PTERQ96BW5 349 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 NLKQ9UBE8 527 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 STC2O76061 302 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 BPNT1O95861 308 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 LCKP06239 509 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 DCKP27707 260 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 AIMP2Q13155 320 aaKnown RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 GKN2Q86XP6 184 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 C5AR2Q9P296 337 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 FMO6PO60774 539 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 CNR2P34972 360 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 RING1Q06587 406 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 GARNL3Q5VVW2 1013 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF783Q6ZMS7 281 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 DENND6BQ8NEG7 585 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 OR6Q1Q8NGQ2 317 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 PNPLA2Q96AD5 504 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF705EA8MWA4 302 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 BPIP17213 487 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 KCNJ5P48544 419 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 RHEBQ15382 184 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 FAM189A2Q15884 450 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 OR8K5Q8NH50 307 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 SLC25A44Q96H78 314 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 TMEM19Q96HH6 336 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 PTCHD1Q96NR3 888 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 NUFIP1Q9UHK0 495 aaKnown RBP16.82■□□□□ 0.28
NPHP4-209ENST00000489180 SLCO3A1Q9UIG8 710 aa16.82■□□□□ 0.28
NPHP4-209ENST00000489180 BMP2P12643 396 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 PFKLP17858 780 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 MAP4K2Q12851 820 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 TRAM1Q15629 374 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 OR9Q2Q8NGE9 314 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 DPH7Q9BTV6 452 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ARL6Q9H0F7 186 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 H3BMQ9 156 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ERP29P30040 261 aaKnown RBP16.81■□□□□ 0.28
NPHP4-209ENST00000489180 SCAPQ12770 1279 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 CGB2Q6NT52 195 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 PIWIL3Q7Z3Z3 882 aaKnown RBP16.81■□□□□ 0.28
NPHP4-209ENST00000489180 COG8Q96MW5 612 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 MROQ9BYG7 248 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 KCNN3Q9UGI6 736 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 HEXBP07686 556 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 PRKCAP17252 672 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 CAPZA1P52907 286 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 SNTB2Q13425 540 aaKnown RBP16.81■□□□□ 0.28
NPHP4-209ENST00000489180 SGCAQ16586 387 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 EOGTQ5NDL2 527 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 FCRLBQ6BAA4 426 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 TMEM225Q6GV28 225 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 OR4C11Q6IEV9 310 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 LRFN4Q6PJG9 635 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ELMOD2Q8IZ81 293 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 LRRC25Q8N386 305 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ITFG2Q969R8 447 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ZBTB20Q9HC78 741 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-209ENST00000489180 ZNF840PA6NDX5 716 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 C2orf74A8MZ97 194 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 IL33O95760 270 aa16.81■□□□□ 0.28
NPHP4-209ENST00000489180 GSRP00390 522 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms