RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TP63Q9H3D4 680 aaPredicted RBP21.21■□□□□ 0.99
COL9A3-213ENST00000489045 CXorf21Q9HAI6 301 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 FBN2P35556 2912 aa21.21■□□□□ 0.99
COL9A3-213ENST00000489045 SUPT7LO94864 414 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 FBXO45P0C2W1 286 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 CT62P0C5K7 136 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 GALNT1Q10472 559 aaPredicted RBP21.2■□□□□ 0.98
COL9A3-213ENST00000489045 HYAL4Q2M3T9 481 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 UNC50Q53HI1 259 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 EMC4Q5J8M3 183 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF678Q5SXM1 525 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 PRAMEF20Q5VT98 475 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 LCA5Q86VQ0 697 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 DND1Q8IYX4 353 aaKnown RBP21.2■□□□□ 0.98
COL9A3-213ENST00000489045 FAM13CQ8NE31 585 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 OR10G3Q8NGC4 313 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 HBEGFQ99075 208 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 TXLNGYQ9BZA5 131 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 BRF2Q9HAW0 419 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 COQ3Q9NZJ6 369 aa21.2■□□□□ 0.98
COL9A3-213ENST00000489045 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.2■□□□□ 0.98
COL9A3-213ENST00000489045 DCHS2Q6V1P9 2916 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 C2orf92A0A1B0GVN3 265 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 ATP6AP2A0A1C7CYW4 349 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 NPIPA2E9PIF3 369 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 NPIPA3F8WFD2 350 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 DLX3O60479 287 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 ATP6AP2O75787 350 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 IGHG3P01860 377 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 CELA3AP09093 270 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 CPMP14384 443 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 TNFRSF8P28908 595 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 PTGER4P35408 488 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 XKP51811 444 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 TBL3Q12788 808 aaKnown RBP21.19■□□□□ 0.98
COL9A3-213ENST00000489045 SLC29A2Q14542 456 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 TCHHL1Q5QJ38 904 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-213ENST00000489045 TRILQ7L0X0 811 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 MMP21Q8N119 569 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 FBXW8Q8N3Y1 598 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 RPRMLQ8N4K4 120 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 CDYL2Q8N8U2 506 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF441Q8N8Z8 693 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 SMC6Q96SB8 1091 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 PSMC3IPQ9P2W1 217 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-213ENST00000489045 PCDHA9Q9Y5H5 950 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 CHCHD2Q9Y6H1 151 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-213ENST00000489045 CSMD1Q96PZ7 3565 aa21.19■□□□□ 0.98
COL9A3-213ENST00000489045 GOLGA8RI6L899 631 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 GUCY1B2O75343 617 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 LRATO95237 230 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 FREM3P0C091 2139 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 PORP16435 677 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-213ENST00000489045 NT5EP21589 574 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 SERPINB3P29508 390 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 KCNJ2P63252 427 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 FUT7Q11130 342 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 RASA2Q15283 850 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 NTRK2Q16620 822 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 C6orf163Q5TEZ5 329 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 TMEM211Q6ICI0 200 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 SLC48A1Q6P1K1 146 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 TMEM64Q6YI46 380 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 GSPT2Q8IYD1 628 aaKnown RBP21.18■□□□□ 0.98
COL9A3-213ENST00000489045 TAGAPQ8N103 731 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 C1orf52Q8N6N3 182 aaKnown RBP21.18■□□□□ 0.98
COL9A3-213ENST00000489045 OR5M3Q8NGP4 307 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 CA5BP1Q8WTZ4 195 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF382Q96SR6 550 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 EPB41L4BQ9H329 900 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 PROK2Q9HC23 129 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 PNPLA3Q9NST1 481 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 CNIH4Q9P003 139 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 FETUBQ9UGM5 382 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 CES1P1Q9UKY3 287 aa21.18■□□□□ 0.98
COL9A3-213ENST00000489045 C1orf226A1L170 272 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 OR14I1A6ND48 311 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 MANBAO00462 879 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 ATP5F1P24539 256 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-213ENST00000489045 KIR3DL1P43629 444 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 GXYLT1Q4G148 440 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 HLA-DQA1Q5Y7H0 255 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 GDF7Q7Z4P5 450 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF615Q8N8J6 731 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 LRRN4CLQ8ND94 238 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 OR5M9Q8NGP3 310 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 ACMSDQ8TDX5 336 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 TP53INP1Q96A56 240 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 TM4SF18Q96CE8 201 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 OR10A5Q9H207 317 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 ZNF703Q9H7S9 590 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-213ENST00000489045 RYDENQ9NUL5 291 aaKnown RBP21.17■□□□□ 0.98
COL9A3-213ENST00000489045 NMRK1Q9NWW6 199 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 TNFRSF10DQ9UBN6 386 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 TBK1Q9UHD2 729 aa21.17■□□□□ 0.98
COL9A3-213ENST00000489045 CNOT11Q9UKZ1 510 aaKnown RBP21.17■□□□□ 0.98
COL9A3-213ENST00000489045 BOKQ9UMX3 212 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-213ENST00000489045 HCFC1P51610 2035 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 A0A1B0GVC2 190 aa21.16■□□□□ 0.98
COL9A3-213ENST00000489045 LRRC3CA6NJW4 275 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms