RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 LIN28AQ9H9Z2 209 aaKnown RBP5.52□□□□□ -1.53
CDHR3-213ENST00000488386 STMN3Q9NZ72 180 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 CD274Q9NZQ7 290 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 TXNDC16Q9P2K2 825 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 RNF14Q9UBS8 474 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 PLEKHB1Q9UF11 243 aaPredicted RBP5.52□□□□□ -1.53
CDHR3-213ENST00000488386 ST6GALNAC2Q9UJ37 374 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 UTP11Q9Y3A2 253 aaKnown RBP5.52□□□□□ -1.53
CDHR3-213ENST00000488386 SLC22A7Q9Y694 548 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 SVILO95425 2214 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 FLNBO75369 2602 aaKnown RBP5.52□□□□□ -1.53
CDHR3-213ENST00000488386 CNTRLQ7Z7A1 2325 aa5.52□□□□□ -1.53
CDHR3-213ENST00000488386 A0A1W2PQ72 361 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ARHGAP10A1A4S6 786 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 OR5H15A6NDH6 313 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 GABRR3A8MPY1 467 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 LRRTM2O43300 516 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PRKNO60260 465 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PRKRAO75569 313 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 LY86O95711 162 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 LDLRP01130 860 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 SMIM10L1P0DMW3 83 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PCNAP12004 261 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 TFEBP19484 476 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 RFC3P40938 356 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PIK3CGP48736 1102 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 NR0B1P51843 470 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 TDGF1P3P51864 188 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 SLC26A5P58743 744 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 RAB10P61026 200 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 CDKL1Q00532 357 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 HSF1Q00613 529 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ID2Q02363 134 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 OC90Q02509 493 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 CHIT1Q13231 466 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 RIN1Q13671 783 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 TUBA3CQ13748 450 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 DDX39BQ13838 428 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 DOC2AQ14183 400 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 HERC3Q15034 1050 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZKSCAN8Q15776 578 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 XKR6Q5GH73 641 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF766Q5HY98 468 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ACER2Q5QJU3 275 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ABHD17BQ5VST6 288 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PLAG1Q6DJT9 500 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 C8orf74Q6P047 294 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 TUBA3EQ6PEY2 450 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF793Q6ZN11 406 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ABHD13Q7L211 337 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 MAATS1Q7Z4T9 603 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ADAMTSL2Q86TH1 951 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF321PQ8N8H1 164 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 NOA1Q8NC60 698 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ST6GALNAC3Q8NDV1 305 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PLPP5Q8NEB5 264 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 TSPEARQ8WU66 669 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 GCDHQ92947 438 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 MS4A6EQ96DS6 147 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 SMIM10Q96HG1 83 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 VPS50Q96JG6 964 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 OR14A2Q96R54 314 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 F2RL3Q96RI0 385 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 LPAR4Q99677 370 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 BARD1Q99728 777 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 SARGQ9BW04 601 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 POPDC3Q9HBV1 291 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 PNO1Q9NRX1 252 aaKnown RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 AGPAT4Q9NRZ5 378 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZDHHC18Q9NUE0 388 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 CCM2LQ9NUG4 571 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 OLAHQ9NV23 265 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 DNAJC11Q9NVH1 559 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 NSMCE4AQ9NXX6 385 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 NINJ2Q9NZG7 142 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 C19orf25Q9UFG5 118 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF223Q9UK11 482 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 ZNF490Q9ULM2 529 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-213ENST00000488386 KCNE2Q9Y6J6 123 aa5.51□□□□□ -1.53
CDHR3-213ENST00000488386 HIVEP3Q5T1R4 2406 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PTPN13Q12923 2485 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 EML6Q6ZMW3 1958 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TRAV17A0A0B4J275 112 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TRGV8A0A0C4DH27 118 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TRBV11-1A0A0K0K1C0 115 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 LRIT2A6NDA9 550 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 WASHC1A8K0Z3 465 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MAGEB17A8MXT2 336 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PSMD12O00232 456 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 NDC80O14777 642 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 EIF3HO15372 352 aaKnown RBP eCLIP5.5□□□□□ -1.53
CDHR3-213ENST00000488386 KLHL41O60662 606 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 ZG16O60844 167 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 LDB3O75112 727 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 TMEM127O75204 238 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 STK16O75716 305 aa5.5□□□□□ -1.53
CDHR3-213ENST00000488386 MYO1DO94832 1006 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms