RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RNF111Q6ZNA4 994 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 DGAT2L6Q6ZPD8 337 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 LINC00696Q6ZRV3 163 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 KIF2BQ8N4N8 673 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 NATD1Q8N6N6 113 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ADCY4Q8NFM4 1077 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 OR5L2Q8NGL0 311 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ZFP28Q8NHY6 868 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ELP5Q8TE02 316 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 THAP3Q8WTV1 239 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 FBXL20Q96IG2 436 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF681Q96N22 645 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 SIKE1Q9BRV8 207 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 NUDT9Q9BW91 350 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF552Q9H707 407 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 CXorf21Q9HAI6 301 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 TCF7L2Q9NQB0 619 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ZNF71Q9NQZ8 489 aaPredicted RBP14.66□□□□□ -0.06
C9orf3-219ENST00000488186 BCAP29Q9UHQ4 241 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ATP6V1HQ9UI12 483 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 DCTN4Q9UJW0 460 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 ERVK-19Q9WJR5 959 aa14.66□□□□□ -0.06
C9orf3-219ENST00000488186 PCSK5Q92824 1860 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 BOD1L1Q8NFC6 3051 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 A0A0G2JND7 137 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 MYO1GB0I1T2 1018 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 TBX19O60806 448 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 DDAH2O95865 285 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 ATP1B1P05026 303 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 IDO1P14902 403 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 CLNS1AP54105 237 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 NME5P56597 212 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 STX1BP61266 288 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 MAP4K2Q12851 820 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 LY6DQ14210 128 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 MEP1AQ16819 746 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 LSM12Q3MHD2 195 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 HLA-DQA1Q5Y7H0 255 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 FCRLBQ6BAA4 426 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 ASB18Q6ZVZ8 466 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 SLC29A4Q7RTT9 530 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 MAVSQ7Z434 540 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 RPS19BP1Q86WX3 136 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 HPS6Q86YV9 775 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 VWA5B2Q8N398 1253 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 KRTCAP2Q8N6L1 136 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 AMER2Q8N7J2 671 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 EXD3Q8N9H8 876 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 APCDD1LQ8NCL9 501 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 OR7G1Q8NGA0 311 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 OR7A2PQ8NGA2 310 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 ZBED6CLQ96FA7 236 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 MAELQ96JY0 434 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 BBC3Q96PG8 261 aaPredicted RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 OR52B2Q96RD2 323 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 LMF1Q96S06 567 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 CCDC28BQ9BUN5 200 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 SLC25A18Q9H1K4 315 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 CDCP1Q9H5V8 836 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 CCDC134Q9H6E4 229 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 FGFR1OP2Q9NVK5 253 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 PPIEQ9UNP9 301 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 EXO1Q9UQ84 846 aaKnown RBP14.65□□□□□ -0.06
C9orf3-219ENST00000488186 CROCCQ5TZA2 2017 aa14.65□□□□□ -0.06
C9orf3-219ENST00000488186 BSNQ9UPA5 3926 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 CFAP46Q8IYW2 2715 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 DYTNA2CJ06 578 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 EIF4E1BA6NMX2 242 aaKnown RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 FCHO1O14526 889 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 BCAS2O75934 225 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 SRSF11Q05519 484 aaKnown RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 PDE7AQ13946 482 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 GSTA3Q16772 222 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 PRICKLE4Q2TBC4 344 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 ACER2Q5QJU3 275 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 B3GNTL1Q67FW5 361 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 FAM111BQ6SJ93 734 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 ZADH2Q8N4Q0 377 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF321PQ8N8H1 164 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 OR9A2Q8NGT5 310 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF721Q8TF20 911 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 KAT2AQ92830 837 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 CIDECQ96AQ7 238 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF764Q96H86 408 aaPredicted RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 SMAD5Q99717 465 aaKnown RBP14.64□□□□□ -0.07
C9orf3-219ENST00000488186 SEMA4CQ9C0C4 833 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 OR10A5Q9H207 317 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 AIG1Q9NVV5 245 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 CFL2Q9Y281 166 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 TP53TG5Q9Y2B4 290 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 CNTRLQ7Z7A1 2325 aa14.64□□□□□ -0.07
C9orf3-219ENST00000488186 A0A1W2PRB8 838 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 OR6C76A6NM76 312 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 E9PBE3 544 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 HRKO00198 91 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 DPM1O60762 260 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 ALDOCP09972 364 aaKnown RBP14.63□□□□□ -0.07
C9orf3-219ENST00000488186 CT62P0C5K7 136 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms