RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 DDX28Q9NUL7 540 aaKnown RBP3.33□□□□□ -1.88
PTEN-204ENST00000487939 TAS2R16Q9NYV7 291 aa3.33□□□□□ -1.88
PTEN-204ENST00000487939 SH3PXD2BA1X283 911 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 SMIM30A4D0T7 59 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 ZSCAN5CA6NGD5 496 aaPredicted RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 CHEK1O14757 476 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 NUDT14O95848 222 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 SLC7A2P52569 658 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 IST1P53990 364 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 KIAA1024LP59773 190 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 GK2Q14410 553 aaPredicted RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 SHROOM1Q2M3G4 852 aaPredicted RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 ZNF674Q2M3X9 581 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 CCBE1Q6UXH8 406 aaPredicted RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 GPR142Q7Z601 462 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 IQCA1Q86XH1 822 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 C11orf53Q8IXP5 236 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 CCDC170Q8IYT3 715 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 KLHL30-AS1Q8NEE0 82 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 PPP1R16AQ96I34 528 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 CNOT6LQ96LI5 555 aaKnown RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 PRAM1Q96QH2 718 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 FAM213AQ9BRX8 229 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 TTYH2Q9BSA4 534 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 FUNDC2Q9BWH2 189 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 DCLRE1BQ9H816 532 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 VPS54Q9P1Q0 977 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 TUBGCP4Q9UGJ1 667 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 MLXQ9UH92 298 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 RSPH14Q9UHP6 348 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 DIMT1Q9UNQ2 313 aaKnown RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 MRPS2Q9Y399 296 aaKnown RBP3.32□□□□□ -1.88
PTEN-204ENST00000487939 AFF2P51816 1311 aa3.32□□□□□ -1.88
PTEN-204ENST00000487939 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 A0A1W2PQ72 361 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 SLC28A1O00337 649 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 FMO6PO60774 539 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 RTN2O75298 545 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 AKAP3O75969 853 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 GOT2P00505 430 aaKnown RBP3.31□□□□□ -1.88
PTEN-204ENST00000487939 KLK2P20151 261 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 FNTAP49354 379 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 SMSP52788 366 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 NDST1P52848 882 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 MFAP2P55001 183 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 NME5P56597 212 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 KRT31Q15323 416 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 SGCBQ16585 318 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 RNF212Q495C1 297 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 FHL5Q5TD97 284 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 MOB2Q70IA6 237 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 ASRGL1Q7L266 308 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 LINC00518Q8N0U6 118 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 PTP4A1Q93096 173 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 C5orf30Q96GV9 206 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 COG3Q96JB2 828 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 ST6GALNAC5Q9BVH7 336 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 MRPL9Q9BYD2 267 aaKnown RBP3.31□□□□□ -1.88
PTEN-204ENST00000487939 RNF41Q9H4P4 317 aaPredicted RBP3.31□□□□□ -1.88
PTEN-204ENST00000487939 DCTPP1Q9H773 170 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 B4GALT7Q9UBV7 327 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 SNX5Q9Y5X3 404 aa3.31□□□□□ -1.88
PTEN-204ENST00000487939 IGHV3OR16-12A0A075B7B8 117 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 A0A1W2PRV1 198 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 FCARP24071 287 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 CASP3P42574 277 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 ARHGDIAP52565 204 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 HERV-K104P63124 156 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 LTB4RQ15722 352 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 PPP1R3AQ16821 1122 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 SLC39A12Q504Y0 691 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 PRR30Q53SZ7 412 aaPredicted RBP3.3□□□□□ -1.88
PTEN-204ENST00000487939 STEAP1BQ6NZ63 245 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 CDC42EP5Q6NZY7 148 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 APOOLQ6UXV4 268 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 OR4A16Q8NH70 328 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 VN1R17PQ8TDU5 208 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 MRPL53Q96EL3 112 aaKnown RBP3.3□□□□□ -1.88
PTEN-204ENST00000487939 SLITRK2Q9H156 845 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 ZNF446Q9NWS9 450 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 RAI14Q9P0K7 980 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 RCOR3Q9P2K3 495 aaPredicted RBP3.3□□□□□ -1.88
PTEN-204ENST00000487939 ERVK-18Q9QC07 812 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 NARFQ9UHQ1 456 aa3.3□□□□□ -1.88
PTEN-204ENST00000487939 TRABD2BA6NFA1 517 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 EEF2KO00418 725 aaKnown RBP3.29□□□□□ -1.88
PTEN-204ENST00000487939 HAT1O14929 419 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 ATP6V1G1O75348 118 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 PRAMEF12O95522 483 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 AZU1P20160 251 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 ACADSBP45954 432 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 NSFP46459 744 aaKnown RBP3.29□□□□□ -1.88
PTEN-204ENST00000487939 TKTL1P51854 596 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 MSLNQ13421 630 aaPredicted RBP3.29□□□□□ -1.88
PTEN-204ENST00000487939 KLF5Q13887 457 aaPredicted RBP3.29□□□□□ -1.88
PTEN-204ENST00000487939 EXOSC7Q15024 291 aaKnown RBP3.29□□□□□ -1.88
PTEN-204ENST00000487939 MICAQ29983 383 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 ACER2Q5QJU3 275 aa3.29□□□□□ -1.88
PTEN-204ENST00000487939 HIST2H2AA3Q6FI13 130 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms