RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 TOM1L1O75674 476 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 AK1P00568 194 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 ZCCHC18P0CG32 403 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 NCF1P14598 390 aaPredicted RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 CD1DP15813 335 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 ACAA2P42765 397 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 PEX3P56589 373 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 GSCP56915 257 aaPredicted RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 HSF2Q03933 536 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 FASTKQ14296 549 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 ZSWIM7Q19AV6 140 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 KNOP1Q1ED39 458 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 HKDC1Q2TB90 917 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 DPY19L2P2Q6ZN68 376 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 ZFAND4Q86XD8 727 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 GIPC3Q8TF64 312 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 PINX1Q96BK5 328 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 ART5Q96L15 291 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 CAPNS2Q96L46 248 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 TNFRSF13CQ96RJ3 184 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 LGMNQ99538 433 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 THUMPD2Q9BTF0 503 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 WRAP53Q9BUR4 548 aaKnown RBP4.84□□□□□ -1.63
CUL3-211ENST00000487558 NLNQ9BYT8 704 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 EGLN1Q9GZT9 426 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 VPS33BQ9H267 617 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 COQ10BQ9H8M1 238 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 WDR41Q9HAD4 459 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 IL1RAPQ9NPH3 570 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 YAE1D1Q9NRH1 226 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 ATXN10Q9UBB4 475 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 TMCC3Q9ULS5 477 aa4.84□□□□□ -1.63
CUL3-211ENST00000487558 AFF2P51816 1311 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ANKRD30BLA7E2S9 258 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 FBP2O00757 339 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 VPS26AO75436 327 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ZNF821O75541 412 aaPredicted RBP4.83□□□□□ -1.64
CUL3-211ENST00000487558 ZSCAN5DPP0CG00 497 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ADORA3P0DMS8 318 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 SLC1A6P48664 564 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 HSD17B7P56937 341 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 RPS27AP62979 156 aaKnown RBP4.83□□□□□ -1.64
CUL3-211ENST00000487558 HERVK_113P63132 956 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ERVK-8P63133 956 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 FASTKD3Q14CZ7 662 aaKnown RBP4.83□□□□□ -1.64
CUL3-211ENST00000487558 RHBDD2Q6NTF9 364 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ABRAXAS1Q6UWZ7 409 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 Q6ZTC4 211 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 RANBP3LQ86VV4 465 aaPredicted RBP4.83□□□□□ -1.64
CUL3-211ENST00000487558 AMZ2Q86W34 360 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 GPBP1Q86WP2 473 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 HSCBQ8IWL3 235 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 PYROXD2Q8N2H3 581 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 RELL2Q8NC24 303 aaPredicted RBP4.83□□□□□ -1.64
CUL3-211ENST00000487558 CCDC51Q96ER9 411 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ERVK-6Q9BXR3 956 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 SP140LQ9H930 580 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 GTSE1Q9NYZ3 720 aa4.83□□□□□ -1.64
CUL3-211ENST00000487558 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
CUL3-211ENST00000487558 CUX2O14529 1486 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 CYSRT1A8MQ03 144 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 E9PMD0 336 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 SGK494L7N484 410 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 PDXKO00764 312 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 DUS4LO95620 317 aaKnown RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 TNNI3P19429 210 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 IL4RP24394 825 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 PTPN6P29350 595 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 FUT7Q11130 342 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 NECTIN1Q15223 517 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 PARP6Q2NL67 630 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 MS4A18Q3C1V0 323 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 RIPPLY2Q5TAB7 128 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 LMNTD2Q8IXW0 634 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 CHDHQ8NE62 594 aaPredicted RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 OR1K1Q8NGR3 316 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 WDR36Q8NI36 951 aaKnown RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 C11orf52Q96A22 123 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 CARD6Q9BX69 1037 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 STRADBQ9C0K7 418 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 UPF3AQ9H1J1 476 aaKnown RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 ZDHHC18Q9NUE0 388 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 THYN1Q9P016 225 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 EIF3KQ9UBQ5 218 aaKnown RBP4.82□□□□□ -1.64
CUL3-211ENST00000487558 CHMP2BQ9UQN3 213 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 KLHDC2Q9Y2U9 406 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 WDR81Q562E7 1941 aa4.82□□□□□ -1.64
CUL3-211ENST00000487558 BCLAF3A2AJT9 711 aaKnown RBP4.81□□□□□ -1.64
CUL3-211ENST00000487558 IGLON5A6NGN9 336 aa4.81□□□□□ -1.64
CUL3-211ENST00000487558 ZNF724A8MTY0 619 aa4.81□□□□□ -1.64
CUL3-211ENST00000487558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.81□□□□□ -1.64
CUL3-211ENST00000487558 DUSP11O75319 330 aaKnown RBP4.81□□□□□ -1.64
CUL3-211ENST00000487558 IDH1O75874 414 aaKnown RBP4.81□□□□□ -1.64
CUL3-211ENST00000487558 STK17BO94768 372 aa4.81□□□□□ -1.64
CUL3-211ENST00000487558 IGKV3-20P01619 116 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms