RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 AMER2Q8N7J2 671 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 STT3BQ8TCJ2 826 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 ELP4Q96EB1 424 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 DPH2Q9BQC3 489 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 DENND2DQ9H6A0 471 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 MKKSQ9NPJ1 570 aaPredicted RBP13.62□□□□□ -0.23
LRIF1-202ENST00000485275 GIMAP4Q9NUV9 329 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 MAT2BQ9NZL9 334 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 L3MBTL1Q9Y468 752 aa13.62□□□□□ -0.23
LRIF1-202ENST00000485275 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 HRKO00198 91 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 ACOT8O14734 319 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 SLC30A4O14863 429 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 CEACAM1P13688 526 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
LRIF1-202ENST00000485275 GPX2P18283 190 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 UQCRC2P22695 453 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 GPC1P35052 558 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
LRIF1-202ENST00000485275 DUSP8Q13202 625 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 ADRM1Q16186 407 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 FXNQ16595 210 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 MINDY4Q4G0A6 757 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 TRMT12Q53H54 448 aaKnown RBP13.61□□□□□ -0.23
LRIF1-202ENST00000485275 FHL5Q5TD97 284 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 FAM198BQ6UWH4 519 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 QSOX2Q6ZRP7 698 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 RNF130Q86XS8 419 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 GIMAP5Q96F15 307 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 MAGED4Q96JG8 741 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 SPSB2Q99619 263 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 TGIF2Q9GZN2 237 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 VN1R1Q9GZP7 353 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
LRIF1-202ENST00000485275 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
LRIF1-202ENST00000485275 MRPS33Q9Y291 106 aaKnown RBP13.61□□□□□ -0.23
LRIF1-202ENST00000485275 BLACEA4D250 179 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TMX2-CTNND1H3BSU7 103 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 UPK1AO00322 258 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 HBQ1P09105 142 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 JMJD7P0C870 316 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SLC35E2P0CK97 266 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ETFAP13804 333 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ME2P23368 584 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CCT3P49368 545 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 RAB15P59190 212 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 KPNB1Q14974 876 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 RGNQ15493 299 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 NKG7Q16617 165 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 DCAF12Q5T6F0 453 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 MRPL14Q6P1L8 145 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CYB5D1Q6P9G0 228 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CEACAM20Q6UY09 585 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TMEM64Q6YI46 380 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TIPARPQ7Z3E1 657 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 PTOV1Q86YD1 416 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ARHGAP24Q8N264 748 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 GALNT6Q8NCL4 622 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CTHRC1Q96CG8 243 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 NEURL3Q96EH8 262 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 OTUB1Q96FW1 271 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 LRFN5Q96NI6 719 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 DDA1Q9BW61 102 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SPRY4Q9C004 299 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ZCCHC3Q9NUD5 404 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 PTPRZ1P23471 2315 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 VSTM2BA6NLU5 285 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CLDN4O14493 209 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 STK17BO94768 372 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 DLGAP3O95886 979 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ZGLP1P0C6A0 271 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CDK4P11802 303 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ATP6V1B2P21281 511 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CHI3L1P36222 383 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ELF3P78545 371 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 STX4Q12846 297 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TP53BP2Q13625 1128 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ANGPTL8Q6UXH0 198 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 LANCL3Q6ZV70 420 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 OVCH1Q7RTY7 1134 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SZRD1Q7Z422 152 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SAMD14Q8IZD0 417 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 OR2L13Q8N349 312 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TRIML2Q8N7C3 387 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 OR52N2Q8NGI0 321 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 MAL2Q969L2 176 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 PTCHD1Q96NR3 888 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 TAAR9Q96RI9 348 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 KCTD14Q9BQ13 255 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 SOX17Q9H6I2 414 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-202ENST00000485275 CXorf21Q9HAI6 301 aa13.6□□□□□ -0.23
LRIF1-202ENST00000485275 DLL3Q9NYJ7 618 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms