RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ADAMTSL5Q6ZMM2 481 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 THEM5Q8N1Q8 247 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 GOLGA5Q8TBA6 731 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 GGHQ92820 318 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 FAM162AQ96A26 154 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 BIRC7Q96CA5 298 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 ERP27Q96DN0 273 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 MAGEB18Q96M61 343 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 TUFT1Q9NNX1 390 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 MIEF1Q9NQG6 463 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 DNAJC11Q9NVH1 559 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 RAI1Q7Z5J4 1906 aaPredicted RBP2.09□□□□□ -2.08
VPS50-216ENST00000484954 NACAE9PAV3 2078 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 MEGF6O75095 1541 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 MEI4A8MW99 385 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 STAM2O75886 525 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 GLCEO94923 617 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 SLU7O95391 586 aaKnown RBP2.08□□□□□ -2.08
VPS50-216ENST00000484954 CHRNGP07510 517 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 GSTA2P09210 222 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 FRKP42685 505 aaPredicted RBP2.08□□□□□ -2.08
VPS50-216ENST00000484954 UCNP55089 124 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 GNB2P62879 340 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 TSPY1Q01534 308 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 SLC34A1Q06495 639 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 SCN1BQ07699 218 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 RHBDD2Q6NTF9 364 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 APOOLQ6UXV4 268 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 UNC5CLQ8IV45 518 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 GPR65Q8IYL9 337 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 OR2L5Q8NG80 312 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 OR13F1Q8NGS4 319 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 FBXO25Q8TCJ0 367 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 AFAP1L1Q8TED9 768 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 FAM104AQ969W3 186 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 FAM46BQ96A09 425 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 ULK4Q96C45 1275 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 CDKN2AIPNLQ96HQ2 116 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 CXorf58Q96LI9 332 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 PANX3Q96QZ0 392 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 NTMT1Q9BV86 223 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 EDEM3Q9BZQ6 932 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 ZDHHC6Q9H6R6 413 aa2.08□□□□□ -2.08
VPS50-216ENST00000484954 ARMCX3Q9UH62 379 aaPredicted RBP2.08□□□□□ -2.08
VPS50-216ENST00000484954 FGD5Q6ZNL6 1462 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 B4DXG7 233 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 RAD51DO75771 328 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 ACTL6AO96019 429 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 GH1P01241 217 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 WNT2P09544 360 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 TPBGLP0DKB5 382 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 ZNF17P17021 662 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 ARHGDIBP52566 201 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 EFNA3P52797 238 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 PRKCEQ02156 737 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 ZNF33BQ06732 778 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 MS4A13Q5J8X5 152 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 LRRC38Q5VT99 294 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 C1orf189Q5VU69 101 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 STEAP1BQ6NZ63 245 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 PET117Q6UWS5 81 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 MOB2Q70IA6 237 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 TGIF2LYQ8IUE0 185 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 APOBEC3FQ8IUX4 373 aaKnown RBP2.07□□□□□ -2.08
VPS50-216ENST00000484954 NUP93Q8N1F7 819 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 OR4L1Q8NH43 312 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 EPSTI1Q96J88 318 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 OR5M11Q96RB7 305 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 THUMPD3Q9BV44 507 aaKnown RBP2.07□□□□□ -2.08
VPS50-216ENST00000484954 RAI14Q9P0K7 980 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 SENP1Q9P0U3 644 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 KLHL21Q9UJP4 597 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 FBXL5Q9UKA1 691 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 ERVK-19Q9WJR5 959 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 CA5BQ9Y2D0 317 aa2.07□□□□□ -2.08
VPS50-216ENST00000484954 OOEPA6NGQ2 149 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 SDR42E2A6NKP2 422 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 TTI1O43156 1089 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 TSPAN2O60636 221 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 SLC2A10O95528 541 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 IGKV3-11P04433 115 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 HSPB1P04792 205 aaKnown RBP2.06□□□□□ -2.08
VPS50-216ENST00000484954 MMP10P09238 476 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 ALPIP09923 528 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 C8orf89P0DMQ9 161 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 PVRP15151 417 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 MDKP21741 143 aaPredicted RBP2.06□□□□□ -2.08
VPS50-216ENST00000484954 TRPC1P48995 793 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 HSPA14Q0VDF9 509 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 GIT2Q14161 759 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 EPC2Q52LR7 807 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 NHSL2Q5HYW2 709 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 SLC22A10Q63ZE4 541 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 TATDN1Q6P1N9 297 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 CCDC83Q8IWF9 413 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 ATAD1Q8NBU5 361 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 DEPDC1BQ8WUY9 529 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 RNF138Q8WVD3 245 aa2.06□□□□□ -2.08
VPS50-216ENST00000484954 SNRNP27Q8WVK2 155 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms