RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MAPK12P53778 367 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 PLIN5Q00G26 463 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 COMMD6Q7Z4G1 85 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 SIAH3Q8IW03 269 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 SAMD14Q8IZD0 417 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ST13P4Q8IZP2 240 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 EID3Q8N140 333 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 RNF175Q8N4F7 328 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 CPSF7Q8N684 471 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 HORMAD2Q8N7B1 307 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 NFAM1Q8NET5 270 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 OR8K3Q8NH51 312 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 PHF10Q8WUB8 498 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 VMP1Q96GC9 406 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 RBM18Q96H35 190 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 POM121Q96HA1 1249 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 FAIM2Q9BWQ8 316 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 GATA5Q9BWX5 397 aaPredicted RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ALOXE3Q9BYJ1 711 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 PFDN4Q9NQP4 134 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 FARSBQ9NSD9 589 aaKnown RBP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.29□□□□□ -0.92
CPSF4-213ENST00000484112 FBXW2Q9UKT8 454 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 PSME2Q9UL46 239 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 ATG4BQ9Y4P1 393 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 CLCA3PQ9Y6N3 262 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 PCNX1Q96RV3 2341 aa9.29□□□□□ -0.92
CPSF4-213ENST00000484112 FAM90A27PA6NNH2 459 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SLC28A1O00337 649 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ADAM10O14672 748 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 AZIN1O14977 448 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 RGS14O43566 566 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 CDC40O60508 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SH3BGRLO75368 114 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SPAG7O75391 227 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SLC25A12O75746 678 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 NEURL1O76050 574 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 GPR75O95800 540 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 KLK1P06870 262 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 TPOP07202 933 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 DHRS4L1P0CG22 281 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SLC35E2P0CK97 266 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 NEFHP12036 1026 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 DRD2P14416 443 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 CD1EP15812 388 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 GRK2P25098 689 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 PTGER1P34995 402 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 GPR143P51810 404 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 HNRNPFP52597 415 aaKnown RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 HNRNPH2P55795 449 aaKnown RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ACSM2AQ08AH3 577 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 KRTAP21-3Q3LHN1 58 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SGO1Q5FBB7 561 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ACSM2BQ68CK6 577 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 TMEM200AQ86VY9 491 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 CLYBLQ8N0X4 340 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 APCDD1LQ8NCL9 501 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 TMEM52Q8NDY8 209 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 OR6Y1Q8NGX8 325 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ANKRD9Q96BM1 317 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 C11orf24Q96F05 449 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 DGAT2Q96PD7 388 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 DMRTA2Q96SC8 542 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SORBS1Q9BX66 1292 aaKnown RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 MRPL1Q9BYD6 325 aaKnown RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 ACPTQ9BZG2 426 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 UCK2Q9BZX2 261 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 CENPHQ9H3R5 247 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 SLC17A7Q9P2U7 560 aa9.28□□□□□ -0.92
CPSF4-213ENST00000484112 NCOA6Q14686 2063 aaPredicted RBP9.28□□□□□ -0.92
CPSF4-213ENST00000484112 A0A1B0GTH9 108 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 A0A1W2PR48 441 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 NKX2-6A6NCS4 301 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 TMEM114B3SHH9 223 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 FCHO1O14526 889 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 FGF17O60258 216 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 LDB3O75112 727 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 ZFAND5O76080 213 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 MYO1DO94832 1006 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 AIFM1O95831 613 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 IFNA16P05015 189 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 CD99P14209 185 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 ALOX15P16050 662 aaPredicted RBP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 PIK3R1P27986 724 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 TIA1P31483 386 aaKnown RBP eCLIP9.27□□□□□ -0.93
CPSF4-213ENST00000484112 PTGS2P35354 604 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 RFC3P40938 356 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 SERPINB4P48594 390 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 FOLH1Q04609 750 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 CASP8Q14790 479 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 HEPACAMQ14CZ8 416 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 IMPG1Q17R60 797 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 NDUFAF5Q5TEU4 345 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 KANK2Q63ZY3 851 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 C18orf63Q68DL7 685 aa9.27□□□□□ -0.93
CPSF4-213ENST00000484112 IKBIPQ70UQ0 350 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms