RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 ZNF560Q96MR9 790 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC43Q96MW1 224 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ALKBH3Q96Q83 286 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TAAR6Q96RI8 345 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 LGMNQ99538 433 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 SH3GL3Q99963 347 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 VGLL1Q99990 258 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 UBAC1Q9BSL1 405 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CRACR2AQ9BSW2 395 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 SPZ1Q9BXG8 430 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 EGLN1Q9GZT9 426 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 UPF3AQ9H1J1 476 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 GANQ9H2C0 597 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PLEKHA3Q9HB20 300 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 C3orf14Q9HBI5 128 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 B3GAT2Q9NPZ5 323 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ZCCHC3Q9NUD5 404 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 ACOXLQ9NUZ1 547 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 MED17Q9NVC6 651 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 NUDT4Q9NZJ9 180 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 PAK5Q9P286 719 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 IL19Q9UHD0 177 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 KLK13Q9UKR3 277 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 BLOC1S6Q9UL45 172 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 DNPEPQ9ULA0 475 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 DIMT1Q9UNQ2 313 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 NIP7Q9Y221 180 aaKnown RBP eCLIP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 RPH3AQ9Y2J0 694 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TDRKHQ9Y2W6 561 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 NOSIPQ9Y314 301 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 CAB39Q9Y376 341 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 MRPS2Q9Y399 296 aaKnown RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 MTF2Q9Y483 593 aaPredicted RBP1.84□□□□□ -2.11
ITGB1-213ENST00000484088 N6AMT1Q9Y5N5 214 aa1.84□□□□□ -2.11
ITGB1-213ENST00000484088 TRBV2A0A0J9YWF9 115 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 LINC00854A0A1B0GVQ3 168 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 MACROD2A1Z1Q3 448 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 GOLGA6L10A6NI86 522 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CCDC169A6NNP5 214 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 FBP2O00757 339 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 TFECO14948 347 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CETN3O15182 167 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NOL3O60936 208 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 SORBS2O94875 1100 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 REC8O95072 547 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 AREGP15514 252 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 BCL3P20749 454 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 PKLRP30613 574 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 S100A5P33763 92 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 VEGFCP49767 419 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NT5C2P49902 561 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 HNRNPFP52597 415 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NDUFV3P56181 108 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 HSD17B7P56937 341 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 SRP54P61011 504 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ERVK11-1P61568 191 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ERVK-16P61578 105 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ARF5P84085 180 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 MECOMQ03112 1051 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 PAX8Q06710 450 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 TSTA3Q13630 321 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 EXOSC7Q15024 291 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 PCK2Q16822 640 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 IMMTQ16891 758 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ZSWIM7Q19AV6 140 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 RFTN2Q52LD8 501 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NKAIN2Q5VXU1 208 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 RHBDD2Q6NTF9 364 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 FAAP20Q6NZ36 180 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 KDELC1Q6UW63 502 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 GPRIN3Q6ZVF9 776 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 Q71RC1 249 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CHMP1BQ7LBR1 199 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NUFIP2Q7Z417 695 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CCDC71Q8IV32 467 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ITPRIPQ8IWB1 547 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ELMOD2Q8IZ81 293 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF444Q8N0Y2 327 aaPredicted RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 METTL4Q8N3J2 472 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 GVQW1Q8N7I0 195 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ANKRD20A12PQ8NF67 263 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 OR52B6Q8NGF0 335 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 OR6M1Q8NGM8 313 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 FLVCR1-AS1Q8TAF5 88 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 EXOC6Q8TAG9 804 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ERMNQ8TAM6 284 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ATP6V0A1Q93050 837 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 MRPL24Q96A35 216 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CXorf58Q96LI9 332 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 RCHY1Q96PM5 261 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ATOH8Q96SQ7 321 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 DCTN5Q9BTE1 182 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 LRRC61Q9BV99 259 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 ST6GALNAC5Q9BVH7 336 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 CAPS2Q9BXY5 557 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 OCR1Q9BZK8 76 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NACA2Q9H009 215 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 NSRP1Q9H0G5 558 aaKnown RBP1.83□□□□□ -2.12
ITGB1-213ENST00000484088 SIRPDQ9H106 197 aa1.83□□□□□ -2.12
ITGB1-213ENST00000484088 SLC26A1Q9H2B4 701 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms