RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PRR22Q8IZ63 422 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 ST13P4Q8IZP2 240 aaPredicted RBP11.74□□□□□ -0.53
UBR4-213ENST00000483922 ZNF615Q8N8J6 731 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 SNX31Q8N9S9 440 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 FAM83FQ8NEG4 500 aaPredicted RBP11.74□□□□□ -0.53
UBR4-213ENST00000483922 OR7G3Q8NG95 312 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
UBR4-213ENST00000483922 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
UBR4-213ENST00000483922 ADIPOR1Q96A54 375 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 ZNF597Q96LX8 424 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 PIP5K1AQ99755 562 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 PIGQQ9BRB3 760 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 NAT9Q9BTE0 207 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 ROGDIQ9GZN7 287 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 DERL2Q9GZP9 239 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 MTO1Q9Y2Z2 717 aaKnown RBP11.74□□□□□ -0.53
UBR4-213ENST00000483922 ASB4Q9Y574 426 aa11.74□□□□□ -0.53
UBR4-213ENST00000483922 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 IQANK1A0A1B0GTG1 560 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 A0A1W2PR48 441 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 FAM171A2A8MVW0 826 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 PLPP1O14494 284 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 GNB5O14775 395 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 ARHGEF9O43307 516 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 EEDO75530 441 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 TNFSF13O75888 250 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 RCBTB2O95199 551 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 GOSR1O95249 250 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 GPR75O95800 540 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 COX7A2P14406 83 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 CPN1P15169 458 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 CD1DP15813 335 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 LOXP28300 417 aaPredicted RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 KRTAP1-1Q07627 177 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 FAM27E3Q08E93 113 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 CAPRIN1Q14444 709 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 FASTKD3Q14CZ7 662 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 PDK4Q16654 411 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 AP5B1Q2VPB7 878 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 TMEM35AQ53FP2 167 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 KHDRBS2Q5VWX1 349 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 TIGD3Q6B0B8 471 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 PRSS57Q6UWY2 283 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 RNF111Q6ZNA4 994 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 FRA10AC1Q70Z53 315 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 GPR180Q86V85 440 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 GPSM1Q86YR5 675 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 TANKQ92844 425 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 ISL2Q96A47 359 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 MARK4Q96L34 752 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 WFIKKN1Q96NZ8 548 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 PHACTR1Q9C0D0 580 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 TEX10Q9NXF1 929 aaPredicted RBP11.73□□□□□ -0.53
UBR4-213ENST00000483922 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 FETUBQ9UGM5 382 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 TRPS1Q9UHF7 1281 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
UBR4-213ENST00000483922 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 B4DXG7 233 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 PGRMC2O15173 223 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 PHGDHO43175 533 aaKnown RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 TMPRSS11DO60235 418 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 SMPD2O60906 423 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 SNX4O95219 450 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 ABCB1P08183 1280 aaPredicted RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 S1PR1P21453 382 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 HPDP32754 393 aaPredicted RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 SSR2P43308 183 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 FNTAP49354 379 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 IRF8Q02556 426 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 TGM3Q08188 693 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 BIKQ13323 160 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 LAPTM5Q13571 262 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 FRG1Q14331 258 aaKnown RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 RPS6KA2Q15349 733 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 TBCELQ5QJ74 424 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 CAPN12Q6ZSI9 719 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 P3H2Q8IVL5 708 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 PDPRQ8NCN5 879 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 SIMC1Q8NDZ2 872 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 SRFBP1Q8NEF9 429 aaKnown RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 RIT1Q92963 219 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 TP53INP1Q96A56 240 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 INTS12Q96CB8 462 aaKnown RBP11.72□□□□□ -0.53
UBR4-213ENST00000483922 CTHRC1Q96CG8 243 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 PBKQ96KB5 322 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 UCN2Q96RP3 112 aa11.72□□□□□ -0.53
UBR4-213ENST00000483922 NODALQ96S42 347 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms