RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZNF786Q8N393 782 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 AVL9Q8NBF6 648 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 GPR32P1Q8NGA4 272 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 XAGE5Q8WWM1 108 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 KAT2AQ92830 837 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 TBC1D20Q96BZ9 403 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 RBM4BQ9BQ04 359 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 TREX2Q9BQ50 279 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 RBM4Q9BWF3 364 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR51I1Q9H343 314 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PAPOLBQ9NRJ5 636 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 USE1Q9NZ43 259 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PDP1Q9P0J1 537 aaPredicted RBP8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 POMT2Q9UKY4 750 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 DAPP1Q9UN19 280 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF451Q9Y4E5 1061 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM221BA6H8Z2 402 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM227AF5H4B4 570 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 H0YAE9 185 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 MED26O95402 600 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 HPRP00739 348 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 NR2F6P10588 404 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ALOX12P18054 663 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 RRM2P31350 389 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 FASLGP48023 281 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ITGA1P56199 1179 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 VSX2P58304 361 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ID2Q02363 134 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 FUT5Q11128 374 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 LIN52Q52LA3 116 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 OOSP2Q86WS3 158 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 TSPAN14Q8NG11 270 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR52J3Q8NH60 311 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 APOBEC4Q8WW27 367 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 POP5Q969H6 163 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 SDCCAG3Q96C92 435 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 RMND5BQ96G75 393 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 TSC22D3Q99576 134 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 A4GALTQ9NPC4 353 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 FBXO9Q9UK97 447 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 TESMINQ9Y4I5 508 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARID1BQ8NFD5 2236 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC9B1P1A6NJY1 282 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 FFAR1O14842 300 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 UBXN7O94888 489 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 MFN2O95140 757 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 CSNK2A2P19784 350 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 NTSP30990 170 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 CLCN2P51788 898 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 NXPH1P58417 271 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 TCF15Q12870 199 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ELOCQ15369 112 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 KDM4DQ6B0I6 523 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 LAIR2Q6ISS4 152 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 TTC33Q6PID6 262 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 HIPK1Q86Z02 1210 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARHGEF39Q8N4T4 335 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 CSNK1A1LQ8N752 337 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 CAMKVQ8NCB2 501 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 RERGQ96A58 199 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 COL26A1Q96A83 441 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZG16BQ96DA0 208 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 ELP4Q96EB1 424 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 MAP3K3Q99759 626 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 EXD2Q9NVH0 621 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 RLIMQ9NVW2 624 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 AASSQ9UDR5 926 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 BAG5Q9UL15 447 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 MYRFQ9Y2G1 1151 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 NAALAD2Q9Y3Q0 740 aa8.32□□□□□ -1.08
CDC42SE1-204ENST00000483763 EML5Q05BV3 1969 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 TRIM64A6NGJ6 449 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 SGK494L7N484 410 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 LDB3O75112 727 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 GUCY1B2O75343 617 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 CYP4B1P13584 511 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 HOXB6P17509 224 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 FPR1P21462 350 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 MATN1P21941 496 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 CPN2P22792 545 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 MPIP34949 423 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 XKP51811 444 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 TNFRSF17Q02223 184 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 RELAQ04206 551 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 TGM3Q08188 693 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 NADK2Q4G0N4 442 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 IFI44LQ53G44 452 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 NKAIN2Q5VXU1 208 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM111BQ6SJ93 734 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAM92BQ6ZTR7 304 aa8.31□□□□□ -1.08
CDC42SE1-204ENST00000483763 IQCHQ86VS3 1027 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms