RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ANKRD10Q9NXR5 420 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 TAS2R7Q9NYW3 318 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 ENTPD4Q9Y227 616 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 YARS2Q9Y2Z4 477 aaKnown RBP19.43■□□□□ 0.7
SEC13-217ENST00000482647 PCDHGA10Q9Y5H3 936 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 UQCRHLA0A096LP55 91 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 KLF11O14901 512 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 ITGA10O75578 1167 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 SDC1P18827 310 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 TRHRP34981 398 aaPredicted RBP19.42■□□□□ 0.7
SEC13-217ENST00000482647 CYB561P49447 251 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 TLE1Q04724 770 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 C6orf136Q5SQH8 315 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 FAM180BQ6P0A1 224 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 OR7G1Q8NGA0 311 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 EGLN2Q96KS0 407 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 PNPOQ9NVS9 261 aa19.42■□□□□ 0.7
SEC13-217ENST00000482647 TMEM200CA6NKL6 621 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 OR6C76A6NM76 312 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 PRAMEF2O60811 474 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 OR2J2O76002 312 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 JUNP05412 331 aaKnown RBP19.41■□□□□ 0.7
SEC13-217ENST00000482647 BCKDHAP12694 445 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 MPIP34949 423 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 ASMTP46597 345 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 HLCSP50747 726 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 SSR4P51571 173 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 HK2P52789 917 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 MLLT10P55197 1068 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 SLC37A1P57057 533 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 FUT7Q11130 342 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 MAP4K2Q12851 820 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 OR1C1Q15619 314 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 PRICKLE4Q2TBC4 344 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 SLC29A4Q7RTT9 530 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 CCDC116Q8IYX3 515 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 TMEM156Q8N614 296 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 FNDC5Q8NAU1 212 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 NUBPLQ8TB37 319 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 ZNF75CPQ92670 426 aaPredicted RBP19.41■□□□□ 0.7
SEC13-217ENST00000482647 TSSK3Q96PN8 268 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 BBS4Q96RK4 519 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 BRINP2Q9C0B6 783 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 LIN28AQ9H9Z2 209 aaKnown RBP19.41■□□□□ 0.7
SEC13-217ENST00000482647 ZNF446Q9NWS9 450 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 LRFN1Q9P244 771 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 GIMAP2Q9UG22 337 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 BAIAP2L1Q9UHR4 511 aa19.41■□□□□ 0.7
SEC13-217ENST00000482647 EXO1Q9UQ84 846 aaKnown RBP19.41■□□□□ 0.7
SEC13-217ENST00000482647 WWP2O00308 870 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 VPS4BO75351 444 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 CT62P0C5K7 136 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 PRPS2P11908 318 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 CD46P15529 392 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 ST13P50502 369 aaKnown RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 PPP2R2AP63151 447 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 MGAT2Q10469 447 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 MAD2L1Q13257 205 aaPredicted RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 INPP5JQ15735 1006 aaPredicted RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 CEBPEQ15744 281 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 MPEG1Q2M385 716 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 SMU1Q2TAY7 513 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 SPINK14Q6IE38 97 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 RPUSD3Q6P087 351 aaKnown RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 C16orf47Q6ZP98 133 aaPredicted RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 C9orf40Q8IXQ3 194 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 VWA5B2Q8N398 1253 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 ADCY4Q8NFM4 1077 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 CPT1CQ8TCG5 803 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 GFM2Q969S9 779 aaKnown RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 PPP1R36Q96LQ0 422 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 C5orf34Q96MH7 638 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 OR10A5Q9H207 317 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 REEP4Q9H6H4 257 aa19.4■□□□□ 0.7
SEC13-217ENST00000482647 TRIM45Q9H8W5 580 aaPredicted RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 EIF3LQ9Y262 564 aaKnown RBP19.4■□□□□ 0.7
SEC13-217ENST00000482647 MYO1GB0I1T2 1018 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 SLCO1B7G3V0H7 640 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 AKAP10O43572 662 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 CLPSP04118 112 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 PLA2G2AP14555 144 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 SSTR4P31391 388 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 OCRLQ01968 901 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 EMX2Q04743 252 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 DUSP2Q05923 314 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 ZNF468Q5VIY5 522 aaPredicted RBP19.39■□□□□ 0.69
SEC13-217ENST00000482647 IL23RQ5VWK5 629 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 LIX1Q8N485 282 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 CISD2Q8N5K1 135 aaKnown RBP19.39■□□□□ 0.69
SEC13-217ENST00000482647 MDS2Q8NDY4 140 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 DYDC1Q8WWB3 177 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 PPCDCQ96CD2 204 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 CTHRC1Q96CG8 243 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 ZNF764Q96H86 408 aaPredicted RBP19.39■□□□□ 0.69
SEC13-217ENST00000482647 SIGLEC12Q96PQ1 595 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 C1orf50Q9BV19 199 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 NUF2Q9BZD4 464 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 AKTIPQ9H8T0 292 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 MAT2BQ9NZL9 334 aa19.39■□□□□ 0.69
SEC13-217ENST00000482647 PCDHGB6Q9Y5F9 930 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms