RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ADAP2Q9NPF8 381 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SLAMF7Q9NQ25 335 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SIRT3Q9NTG7 399 aaPredicted RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 C19orf25Q9UFG5 118 aaPredicted RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 PISDQ9UG56 409 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 ACSL6Q9UKU0 697 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 CFL2Q9Y281 166 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 PCDHGB3Q9Y5G1 929 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 B3GALT1Q9Y5Z6 326 aa9.53□□□□□ -0.88
USP39-215ENST00000481409 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.53□□□□□ -0.88
USP39-215ENST00000481409 SPTBP11277 2137 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 RNF103-CHMP3A0A140T963 221 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TMEM247A6NEH6 219 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 FAM220BPB1ANY3 271 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 C21orf140B9A014 251 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 FAM227AF5H4B4 570 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 HYAL3O43820 417 aaPredicted RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 BRINP1O60477 761 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 B4GALT2O60909 372 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 LDB3O75112 727 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 GMNNO75496 209 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 PRKRAO75569 313 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 PRIM2P49643 509 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 CORO7P57737 925 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 DMTNQ08495 405 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 HSPB3Q12988 150 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TARDBPQ13148 414 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP39-215ENST00000481409 VEZF1Q14119 521 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TRIM25Q14258 630 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 GNA13Q14344 377 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 CAPRIN1Q14444 709 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 RGNQ15493 299 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 ELAVL1Q15717 326 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 NKG7Q16617 165 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 SYT16Q17RD7 645 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 PRSS53Q2L4Q9 553 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 PRICKLE4Q2TBC4 344 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 SPDYE7PQ495Y7 208 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 MTX3Q5HYI7 312 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 PRAMEF17Q5VTA0 474 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 C1orf189Q5VU69 101 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 RIPOR1Q6ZS17 1223 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 ZNF551Q7Z340 670 aaPredicted RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 CALHM3Q86XJ0 350 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 VWA5B2Q8N398 1253 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TMEM52Q8NDY8 209 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 OR52E4Q8NGH9 312 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 OR14A16Q8NHC5 309 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 METTL21AQ8WXB1 218 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 RIT1Q92963 219 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 FAM120BQ96EK7 910 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 REXO5Q96IC2 774 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 MS4A4EQ96PG1 132 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 KCTD14Q9BQ13 255 aaPredicted RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 GPR87Q9BY21 358 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TRIM15Q9C019 465 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TRIM4Q9C037 500 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 TMEM38AQ9H6F2 299 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 EPS8L2Q9H6S3 715 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 CXorf36Q9H7Y0 433 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 CXorf21Q9HAI6 301 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 SLC22A11Q9NSA0 550 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 DDX18Q9NVP1 670 aaKnown RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 SLAMF8Q9P0V8 285 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 C5AR2Q9P296 337 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 MAGEL2Q9UJ55 1249 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 MKL2Q9ULH7 1088 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 C19orf53Q9UNZ5 99 aaPredicted RBP9.52□□□□□ -0.89
USP39-215ENST00000481409 SATB2Q9UPW6 733 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 NEUROG3Q9Y4Z2 214 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 SNX8Q9Y5X2 465 aa9.52□□□□□ -0.89
USP39-215ENST00000481409 PRORSD1PA6NEY8 169 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 C9orf172C9J069 976 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 STMND1H3BQB6 276 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NME4O00746 187 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PRAMEF2O60811 474 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 PSMG1O95456 288 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 AK1P00568 194 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 HEXBP07686 556 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 C8orf89P0DMQ9 161 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ITIH1P19827 911 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NT5EP21589 574 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 RBMS1P29558 406 aaKnown RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 SOAT1P35610 550 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ETV5P41161 510 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 KHKP50053 298 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 CDK9P50750 372 aaKnown RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 LIPEQ05469 1076 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 FUT7Q11130 342 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 GAB1Q13480 694 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ELOAQ14241 798 aaKnown RBP9.51□□□□□ -0.89
USP39-215ENST00000481409 NCF4Q15080 339 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 NSDHLQ15738 373 aa9.51□□□□□ -0.89
USP39-215ENST00000481409 ZNF630Q2M218 657 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms