RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CHRNGP07510 517 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 CD1DP15813 335 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 HLA-DPA1P20036 260 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 HMGB2P26583 209 aaKnown RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 CRYBA2P53672 197 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 GABPAQ06546 454 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 GIT2Q14161 759 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 MLF2Q15773 248 aaPredicted RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 ECSCRQ19T08 205 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 HSP90AB3PQ58FF7 597 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 CDHR3Q6ZTQ4 885 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 FAM131BQ86XD5 332 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 CLEC1AQ8NC01 280 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 ZNF485Q8NCK3 441 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 PRSS33Q8NF86 280 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 SPPL2AQ8TCT8 520 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 MIPOL1Q8TD10 442 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 NPRL2Q8WTW4 380 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 LIPHQ8WWY8 451 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 PRCCQ92733 491 aaPredicted RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 SNX21Q969T3 373 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 PDLIM5Q96HC4 596 aaKnown RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 CABS1Q96KC9 395 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 ERGIC2Q96RQ1 377 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 PKP2Q99959 881 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 RBM4BQ9BQ04 359 aaKnown RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 MRPL9Q9BYD2 267 aaKnown RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 PARLQ9H300 379 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 PLEKHA3Q9HB20 300 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 ZCCHC3Q9NUD5 404 aaKnown RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 PSORS1C1Q9UIG5 152 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 FOXA2Q9Y261 457 aaPredicted RBP3.17□□□□□ -1.9
CBX3-207ENST00000481300 RGS12O14924 1447 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 KIAA1217Q5T5P2 1943 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 MAP3K15Q6ZN16 1313 aa3.17□□□□□ -1.9
CBX3-207ENST00000481300 IGHV3-38A0A0C4DH36 116 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ATP6AP2A0A1C7CYW4 349 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 C5orf51A6NDU8 294 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 TRIM64A6NGJ6 449 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 TRIM64BA6NI03 449 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 A8MXK9 166 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 KERAO60938 352 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ATP6V1G1O75348 118 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 PRDM1O75626 825 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 EPOP01588 193 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 NUDT17P0C025 328 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 VDRP11473 427 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ZNF10P21506 573 aaPredicted RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 TNFSF10P50591 281 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 CCR4P51679 360 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ADARP55265 1226 aaKnown RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 PEX3P56589 373 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 FKBP3Q00688 224 aaKnown RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 ACTN3Q08043 901 aaPredicted RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 LY6DQ14210 128 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ZNF730Q6ZMV8 503 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 SMIM5Q71RC9 77 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 RNF130Q86XS8 419 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 CACUL1Q86Y37 369 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 TBC1D10CQ8IV04 446 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 SERPINA12Q8IW75 414 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 CARNMT1Q8N4J0 409 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 OR6F1Q8NGZ6 308 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 CHPT1Q8WUD6 406 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 ATP6V0A1Q93050 837 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 EEF2KMTQ96G04 330 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 GAL3ST4Q96RP7 486 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 SSX3Q99909 188 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 FAM213AQ9BRX8 229 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 ACAT2Q9BWD1 397 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 STRADBQ9C0K7 418 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 TSPYL1Q9H0U9 437 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 DCTPP1Q9H773 170 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 SP140LQ9H930 580 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 NMUR1Q9HB89 426 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 DNAJC11Q9NVH1 559 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 UBQLN2Q9UHD9 624 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 TRMT112Q9UI30 125 aaKnown RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 OR1A2Q9Y585 309 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 AUP1Q9Y679 476 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 MYH15Q9Y2K3 1946 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 FAM208AQ9UK61 1670 aaKnown RBP3.16□□□□□ -1.9
CBX3-207ENST00000481300 ATP10DQ9P241 1426 aa3.16□□□□□ -1.9
CBX3-207ENST00000481300 PDHXO00330 501 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 OGTO15294 1046 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 ZNF749O43361 778 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 KIAA0513O60268 411 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 SNAP91O60641 907 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 SURF6O75683 361 aaKnown RBP3.15□□□□□ -1.91
CBX3-207ENST00000481300 STBD1O95210 358 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 HPRP00739 348 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 PCCAP05165 728 aaPredicted RBP3.15□□□□□ -1.91
CBX3-207ENST00000481300 PCP11498 1178 aaKnown RBP3.15□□□□□ -1.91
CBX3-207ENST00000481300 P4HA1P13674 534 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 OR1D2P34982 312 aa3.15□□□□□ -1.91
CBX3-207ENST00000481300 RFC4P35249 363 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms