RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TBL3Q12788 808 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 SLAMF1Q13291 335 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 ZKSCAN8Q15776 578 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 KHDRBS2Q5VWX1 349 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 C18orf63Q68DL7 685 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 HEPHL1Q6MZM0 1159 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 MED27Q6P2C8 311 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 POMZP3Q6PJE2 187 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 TMEM64Q6YI46 380 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 DND1Q8IYX4 353 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 ZBED8Q8IZ13 594 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 LIX1Q8N485 282 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 RNF175Q8N4F7 328 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 SLC15A4Q8N697 577 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 OR7G3Q8NG95 312 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 TANKQ92844 425 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 UBE2E3Q969T4 207 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 CMTM7Q96FZ5 175 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 RBM18Q96H35 190 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 ART5Q96L15 291 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 UBXN10Q96LJ8 280 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 JSRP1Q96MG2 331 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 GPR22Q99680 433 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 DOHHQ9BU89 302 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 C19orf24Q9BVV8 132 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 ERVK-6Q9BXR3 956 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 CD244Q9BZW8 370 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 WWTR1Q9GZV5 400 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 UBTD1Q9HAC8 227 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 QPCTLQ9NXS2 382 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 CNIH4Q9P003 139 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 FOXD3Q9UJU5 478 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 CNOT11Q9UKZ1 510 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 RNF112Q9ULX5 631 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 ERVK-19Q9WJR5 959 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 PCDHGB3Q9Y5G1 929 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 NPFFR2Q9Y5X5 522 aa8.63□□□□□ -1.03
SMARCE1-210ENST00000481231 MPDZO75970 2070 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 A0A087X1B8 175 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 IQANK1A0A1B0GTG1 560 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 WASHC1A8K0Z3 465 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 PLPP1O14494 284 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 OR10H2O60403 315 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 TRIM3O75382 744 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 GOSR1O95249 250 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 CLPSP04118 112 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 S100BP04271 92 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 STMN1P16949 149 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 TCP1P17987 556 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 GDF1P27539 372 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SERPINB3P29508 390 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SERPINB1P30740 379 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SSTR1P30872 391 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 CEACAM8P31997 349 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 RPL21P46778 160 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 RAP1GDS1P52306 607 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 HNRNPH2P55795 449 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SLC37A1P57057 533 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 TNFRSF17Q02223 184 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 CRYZQ08257 329 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 ILF2Q12905 390 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 DUSP8Q13202 625 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 DDX39BQ13838 428 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 ZNF267Q14586 743 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 EBPQ15125 230 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 NTRK2Q16620 822 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 DEPDC1Q5TB30 811 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 BICRALQ6AI39 1079 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 OR4C11Q6IEV9 310 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 RNF111Q6ZNA4 994 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SLC29A4Q7RTT9 530 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 GPR180Q86V85 440 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 KIF18BQ86Y91 864 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 CREG2Q8IUH2 290 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 ST13P4Q8IZP2 240 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 ZCCHC7Q8N3Z6 543 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 C7orf57Q8NEG2 295 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 HUS1BQ8NHY5 278 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SMPDL3BQ92485 455 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 RGMAQ96B86 450 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 RBBP8Q99708 897 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 ALG9Q9H6U8 611 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 MS4A12Q9NXJ0 267 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 NUDT4Q9NZJ9 180 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 TXNDC16Q9P2K2 825 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 PHF11Q9UIL8 331 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 SNX24Q9Y343 169 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 MED12Q93074 2177 aa8.62□□□□□ -1.03
SMARCE1-210ENST00000481231 EML6Q6ZMW3 1958 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 TCRBV9S1A1TA0A576 114 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 ANKRD33BA6NCL7 494 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 GLOD5A6NK44 160 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 FAM159BA6NKW6 160 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 EFCAB8A8MWE9 144 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 SUPT3HB4E1H0 165 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 K7EPI3 171 aa8.61□□□□□ -1.03
SMARCE1-210ENST00000481231 UBXN8O00124 270 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms