RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 EMC8O43402 210 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 RECKO95980 971 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 ALBP02768 609 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 GPX2P18283 190 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 TCN1P20061 433 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 MSX2P35548 267 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 MC3RP41968 323 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 STT3AP46977 705 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 NKG7Q16617 165 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 RSPO4Q2I0M5 234 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 ZNF628Q5EBL2 1059 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 FAM111BQ6SJ93 734 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 ANGPTL8Q6UXH0 198 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 TMEM64Q6YI46 380 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 DGAT2L6Q6ZPD8 337 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 SHISA6Q6ZSJ9 500 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 C6orf120Q7Z4R8 191 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 IFNEQ86WN2 208 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 FAM156AQ8NDB6 213 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 PLPP5Q8NEB5 264 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 OR10A6Q8NH74 314 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 SFXN5Q8TD22 340 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 TSLPQ969D9 159 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 FKBP10Q96AY3 582 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 FAM120BQ96EK7 910 aaKnown RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 TMEM121BQ9BXQ6 578 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 SPRY4Q9C004 299 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 VN1R1Q9GZP7 353 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 SLC26A1Q9H2B4 701 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 KAT8Q9H7Z6 458 aaKnown RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 C3orf14Q9HBI5 128 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 ZCCHC3Q9NUD5 404 aaKnown RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 C14orf105Q9NVL8 296 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 DLL3Q9NYJ7 618 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 SLC7A8Q9UHI5 535 aa16.46■□□□□ 0.23
UPF3A-206ENST00000480362 GPN3Q9UHW5 284 aaPredicted RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 RRP15Q9Y3B9 282 aaKnown RBP16.46■□□□□ 0.23
UPF3A-206ENST00000480362 NUP210LQ5VU65 1888 aa16.46■□□□□ 0.22
UPF3A-206ENST00000480362 ZFHX2Q9C0A1 2572 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 IGKV3D-11A0A0A0MRZ8 115 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 PLOD2O00469 737 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 CNOT3O75175 753 aaKnown RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 TNFSF15O95150 251 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 IFNA16P05015 189 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 CT62P0C5K7 136 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 HSD17B1P14061 328 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 SOX18P35713 384 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 GSK3BP49841 420 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 GZMMP51124 257 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 EFNA3P52797 238 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 PRKAG1P54619 331 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 CASP9P55211 416 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 CORO7P57737 925 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 FOXL2P58012 376 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 MRPS35P82673 323 aaKnown RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 MGAT2Q10469 447 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 RGNQ15493 299 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 PRICKLE4Q2TBC4 344 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 SAXO2Q658L1 398 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 MRPL14Q6P1L8 145 aaKnown RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 C6orf15Q6UXA7 325 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF517Q6ZMY9 492 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 GPR155Q7Z3F1 870 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 SZRD1Q7Z422 152 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 C10orf111Q8N326 155 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 GALNT15Q8N3T1 639 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 C7orf57Q8NEG2 295 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 NUP43Q8NFH3 380 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 OR7G2Q8NG99 324 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF675Q8TD23 568 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 MOAP1Q96BY2 351 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 NEURL3Q96EH8 262 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF583Q96ND8 569 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 PELOQ9BRX2 385 aaKnown RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 ALG2Q9H553 416 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 SOX17Q9H6I2 414 aaPredicted RBP16.45■□□□□ 0.22
UPF3A-206ENST00000480362 ANKRA2Q9H9E1 313 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 GPATCH2Q9NW75 528 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 MAT2BQ9NZL9 334 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 FOXJ2Q9P0K8 574 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 USP22Q9UPT9 525 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 CORO2BQ9UQ03 480 aa16.45■□□□□ 0.22
UPF3A-206ENST00000480362 UPK1AO00322 258 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 DNAJA2O60884 412 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 CIB2O75838 187 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 DLGAP3O95886 979 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 HEXBP07686 556 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TNNI3P19429 210 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 CRATP43155 626 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 MVDP53602 400 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 PRR5P85299 388 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 VAC14Q08AM6 782 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 MAP4K2Q12851 820 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TP53BP2Q13625 1128 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 NSDHLQ15738 373 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TRMT12Q53H54 448 aaKnown RBP16.44■□□□□ 0.22
UPF3A-206ENST00000480362 COX20Q5RI15 118 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms