RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PCNX1Q96RV3 2341 aa8.46□□□□□ -1.06
VCP-206ENST00000480327 NCOA6Q14686 2063 aaPredicted RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 IGKV3D-11A0A0A0MRZ8 115 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 IGHV1-45A0A0A0MS14 117 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 NSG1A0A0A6YYJ2 146 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 TCRBV16S1A1N1A0A5B0 115 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 C1orf226A1L170 272 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 NPIPB8E9PQR5 432 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 ZNF195O14628 629 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 LRRTM2O43300 516 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 EDF1O60869 148 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 GPR75O95800 540 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 CELA2AP08217 269 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 G6PDP11413 515 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 COX6A1P12074 109 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 LBPP18428 481 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 PIK3R1P27986 724 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 MAPK1P28482 360 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 FEN1P39748 380 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 DIO3P55073 304 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 NME5P56597 212 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 ERVK-8P63133 956 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 EMX2Q04743 252 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 PTGR1Q14914 329 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 HEPACAMQ14CZ8 416 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 PCOLCEQ15113 449 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 PRSS53Q2L4Q9 553 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 SLC48A1Q6P1K1 146 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 PAPD4Q6PIY7 484 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 EPGNQ6UW88 154 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 LARP4Q71RC2 724 aaKnown RBP eCLIP8.45□□□□□ -1.06
VCP-206ENST00000480327 NDUFAF7Q7L592 441 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 LRRC34Q8IZ02 419 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 OR4K14Q8NGD5 310 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 DNAJB14Q8TBM8 379 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 GRHL3Q8TE85 626 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 KLHL29Q96CT2 875 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 METTL2AQ96IZ6 378 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 FCRL1Q96LA6 429 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 DGAT2Q96PD7 388 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 OR52B2Q96RD2 323 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 WDR77Q9BQA1 342 aaPredicted RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 EBF4Q9BQW3 602 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 ZNF700Q9H0M5 742 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 MYNNQ9NPC7 610 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 MIEF1Q9NQG6 463 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 UTS2RQ9UKP6 389 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 EXO1Q9UQ84 846 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 EIF3LQ9Y262 564 aaKnown RBP8.45□□□□□ -1.06
VCP-206ENST00000480327 TMED5Q9Y3A6 229 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
VCP-206ENST00000480327 POLQO75417 2590 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 LOC102723996A0A087X1L8 192 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 OR10H2O60403 315 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 HPP00738 406 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 ALPPP05187 535 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 ALDOCP09972 364 aaKnown RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 PRR35P0CG20 571 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 PRPS2P11908 318 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 DRD2P14416 443 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 ALOX15P16050 662 aaPredicted RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 EFNA1P20827 205 aaPredicted RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 ITGA3P26006 1051 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 IDH3AP50213 366 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 XKP51811 444 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 DUSP2Q05923 314 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 AIMP2Q13155 320 aaKnown RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 MAD2L1Q13257 205 aaPredicted RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 BTBD16Q32M84 506 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 TMEM198Q66K66 360 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 FAM71E1Q6IPT2 247 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 DGAT2L6Q6ZPD8 337 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 ZADH2Q8N4Q0 377 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 KRTCAP2Q8N6L1 136 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.44□□□□□ -1.06
VCP-206ENST00000480327 RBM18Q96H35 190 aaKnown RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 VPS50Q96JG6 964 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 LPAR4Q99677 370 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 NOP53Q9NZM5 478 aaKnown RBP8.44□□□□□ -1.06
VCP-206ENST00000480327 CES1P1Q9UKY3 287 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 OSGIN2Q9Y236 505 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 ZNF780BQ9Y6R6 833 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 CACNA1CQ13936 2221 aa8.44□□□□□ -1.06
VCP-206ENST00000480327 PKDREJQ9NTG1 2253 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 A0A0G2JND7 137 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 C17orf105B2RV13 164 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 C9JVG2 144 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 E9PBE3 544 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 KLHL41O60662 606 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 ZG16O60844 167 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 CYC1P08574 325 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 CPMP14384 443 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 PORP16435 677 aaPredicted RBP8.43□□□□□ -1.06
VCP-206ENST00000480327 DDCP20711 480 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 NT5EP21589 574 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 GSTM5P46439 218 aa8.43□□□□□ -1.06
VCP-206ENST00000480327 ASMTP46597 345 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms