RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	ARHGAP40	Q5TG30	622 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	AAGAB	Q6PD74	315 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CEACAM20	Q6UY09	585 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TMEM64	Q6YI46	380 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	DGAT2L6	Q6ZPD8	337 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	HORMAD2	Q8N7B1	307 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	BMPER	Q8N8U9	685 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SIMC1	Q8NDZ2	872 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	NUP43	Q8NFH3	380 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	OR7G2	Q8NG99	324 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	RSRC1	Q96IZ7	334 aa	Known RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	NSMCE2	Q96MF7	247 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	ALOXE3	Q9BYJ1	711 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TRIM15	Q9C019	465 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	RAD21L1	Q9H4I0	556 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	GORASP2	Q9H8Y8	452 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	RNPEPL1	Q9HAU8	725 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	C3orf14	Q9HBI5	128 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	LANCL2	Q9NS86	450 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CLDN16	Q9Y5I7	305 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CACNA1H	O95180	2353 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	BLACE	A4D250	179 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	AQP12B	A6NM10	295 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	UPK1A	O00322	258 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CREG1	O75629	220 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	BMP10	O95393	424 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	HMGN2	P05204	90 aa	Known RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	C8B	P07358	591 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SLC35E2	P0CK97	266 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	PPP2R1B	P30154	601 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CCKBR	P32239	447 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	POLE2	P56282	527 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	HSD17B7	P56937	341 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	AP2B1	P63010	937 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	FADD	Q13158	208 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	ILK	Q13418	452 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TRIP6	Q15654	476 aa	Known RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	PRICKLE4	Q2TBC4	344 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	ZNF628	Q5EBL2	1059 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	ERICH5	Q6P6B1	374 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	PIP4P1	Q86T03	277 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	BPHL	Q86WA6	291 aa	Predicted RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.51	□□□□□ -0.73
APTX-223	ENST00000479656	AQP12A	Q8IXF9	295 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SFXN5	Q8TD22	340 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	CANT1	Q8WVQ1	401 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	RAB8B	Q92930	207 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	NCLN	Q969V3	563 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	MOAP1	Q96BY2	351 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	C16orf58	Q96GQ5	468 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SLC35G5	Q96KT7	338 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	PTCHD1	Q96NR3	888 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	YIPF4	Q9BSR8	244 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SERHL2	Q9H4I8	314 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	NECTIN3	Q9NQS3	549 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	SLC22A11	Q9NSA0	550 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TOR4A	Q9NXH8	423 aa		10.51	□□□□□ -0.73
APTX-223	ENST00000479656	TCRBV5S2	A0A599	114 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656		H3BNX3	289 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	PLOD2	O00469	737 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR10H2	O60403	315 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	BAG2	O95816	211 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	CT62	P0C5K7	136 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR12D1	P0DN82	309 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	DSTN	P60981	165 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	PRR5	P85299	388 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	MGAT2	Q10469	447 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	LASP1	Q14847	261 aa	Known RBP	10.5	□□□□□ -0.73
APTX-223	ENST00000479656	SNCB	Q16143	134 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	MINDY4	Q4G0A6	757 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	GCNT6	Q5T4J0	391 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	MFSD4B	Q5TF39	518 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	BHLHB9	Q6PI77	547 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	COX15	Q7KZN9	410 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	LAPTM4B	Q86VI4	370 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	PRSS58	Q8IYP2	241 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	ENDOV	Q8N8Q3	282 aa	Known RBP	10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR56A1	Q8NGH5	318 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR5D16	Q8NGK9	328 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	FAM162A	Q96A26	154 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	SLCO4A1	Q96BD0	722 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OTUB1	Q96FW1	271 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-223	ENST00000479656	RBM18	Q96H35	190 aa	Known RBP	10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR1F2P	Q96R84	312 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	CMKLR1	Q99788	373 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	SPATA9	Q9BWV2	254 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	OR51I1	Q9H343	314 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	EQTN	Q9NQ60	294 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	FBXO8	Q9NRD0	319 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	DDX18	Q9NVP1	670 aa	Known RBP	10.5	□□□□□ -0.73
APTX-223	ENST00000479656	MAT2B	Q9NZL9	334 aa		10.5	□□□□□ -0.73
APTX-223	ENST00000479656	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-223	ENST00000479656	HMGN4	O00479	90 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	HBQ1	P09105	142 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	BMP2	P12643	396 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	ANPEP	P15144	967 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	ZNF28	P17035	718 aa		10.49	□□□□□ -0.73
APTX-223	ENST00000479656	ITIH1	P19827	911 aa		10.49	□□□□□ -0.73

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