RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FCRLBQ6BAA4 426 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 MTERF4Q7Z6M4 381 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 LRRC25Q8N386 305 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 TMEM178AQ8NBL3 297 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 OR2T11Q8NH01 316 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 PPWD1Q96BP3 646 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 KLHL29Q96CT2 875 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 SNRNP40Q96DI7 357 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 MTERF3Q96E29 417 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 ATP6V1G3Q96LB4 118 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 SGCZQ96LD1 299 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 GIMAP4Q9NUV9 329 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 THAP1Q9NVV9 213 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 LRFN1Q9P244 771 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 COPG1Q9Y678 874 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 ZGRF1Q86YA3 2104 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 PIP5K1BO14986 540 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ITM2AO43736 263 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 PRKNO60260 465 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-217ENST00000479161 MAN1A2O60476 641 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 SNNO75324 88 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-217ENST00000479161 LINC00032P0C843 101 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 DDX5P17844 614 aaKnown RBP14.35□□□□□ -0.11
C9orf3-217ENST00000479161 MAPK1P28482 360 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 SSR4P51571 173 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 MLLT10P55197 1068 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ERVK-8P63133 956 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 PSPHP78330 225 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 C2orf80Q0P641 193 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 MGAT2Q10469 447 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF267Q14586 743 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-217ENST00000479161 OR1C1Q15619 314 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF766Q5HY98 468 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 C6orf163Q5TEZ5 329 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 FAM219BQ5XKK7 198 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ATG16L1Q676U5 607 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 OPN5Q6U736 354 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 RNF111Q6ZNA4 994 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 SLC29A4Q7RTT9 530 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF227Q86WZ6 799 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF615Q8N8J6 731 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 SORT1Q99523 831 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ASIC5Q9NY37 505 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 ERVK-19Q9WJR5 959 aa14.35□□□□□ -0.11
C9orf3-217ENST00000479161 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MYOCOSA0A1B0GUC4 107 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 WDR91A4D1P6 747 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ASPDHA6ND91 283 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MYO1GB0I1T2 1018 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 HMGB1P1B2RPK0 211 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 TMEM233B4DJY2 109 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 PLOD3O60568 738 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 LYPLA1O75608 230 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ERAL1O75616 437 aaKnown RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 WISP1O95388 367 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 CRYABP02511 175 aaKnown RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 CLPSP04118 112 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 SP1P08047 785 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 PRPS2P11908 318 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 RPL3P39023 403 aaKnown RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ALDH9A1P49189 494 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 BST1Q10588 318 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MAD2L1Q13257 205 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 EBPQ15125 230 aaKnown RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ATP6AP1LQ52LC2 224 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 C6orf136Q5SQH8 315 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF324BQ6AW86 544 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 SLC25A25Q6KCM7 469 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ATCAYQ86WG3 371 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 C9orf40Q8IXQ3 194 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 DDIASQ8IXT1 998 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 VWA5B2Q8N398 1253 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 TMEM156Q8N614 296 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 NATD1Q8N6N6 113 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF321PQ8N8H1 164 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF441Q8N8Z8 693 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 GOLM1Q8NBJ4 401 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 FAR1Q8WVX9 515 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ARL8AQ96BM9 186 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 C19orf60Q96EN9 201 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 SIGLEC12Q96PQ1 595 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 CNPPD1Q9BV87 410 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 C20orf27Q9GZN8 174 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MIEF1Q9NQG6 463 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MAT2BQ9NZL9 334 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 MAPRE3Q9UPY8 281 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 EXO1Q9UQ84 846 aaKnown RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 ENTPD4Q9Y227 616 aa14.34□□□□□ -0.11
C9orf3-217ENST00000479161 POLR3HQ9Y535 204 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-217ENST00000479161 FLNCQ14315 2725 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 A0A087WV62 115 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 SLCO1B7G3V0H7 640 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 HRKO00198 91 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 PLOD2O00469 737 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 NME2P1O60361 137 aa14.33□□□□□ -0.12
C9orf3-217ENST00000479161 VPS4BO75351 444 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms