RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 BLOC1S5-TXNDC5H3BN57 136 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PRAF2O60831 178 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 EOMESO95936 686 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 IMPA1P29218 277 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 HNF4GQ14541 408 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 WSCD2Q2TBF2 565 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF343Q6P1L6 599 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PAQR6Q6TCH4 344 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF704Q6ZNC4 412 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 SLC9A9Q8IVB4 645 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 B3GNT7Q8NFL0 401 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR8K5Q8NH50 307 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR1S1Q8NH92 325 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FNDC8Q8TC99 324 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 APH1BQ8WW43 257 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 HAS1Q92839 578 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 VCX2Q9H322 139 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FBRSL1Q9HCM7 1045 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 OSGEPQ9NPF4 335 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 GSKIPQ9P0R6 139 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 RAP2CQ9Y3L5 183 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UGT1A9O60656 530 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 CEBPBP17676 345 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DNAJB1P25685 340 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 HOXA10P31260 410 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 PTGER4P35408 488 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NMUP48645 174 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TOB1P50616 345 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 GALCP54803 685 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NME5P56597 212 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 RNF4P78317 190 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 DEFA6Q01524 100 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KLF10Q13118 480 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCNC3Q14003 757 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PPA1Q15181 289 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 GFOD2Q3B7J2 385 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZIK1Q3SY52 487 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 RNF212Q495C1 297 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 RBM44Q6ZP01 1051 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 SSX8Q7RTT4 187 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 YRDCQ86U90 279 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 ACTRT1Q8TDG2 376 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 LMX1AQ8TE12 382 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 BLNKQ8WV28 456 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 LMO7Q8WWI1 1683 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 MYLIPQ8WY64 445 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PIGCQ92535 297 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NRCAMQ92823 1304 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZBTB8AQ96BR9 441 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SORCS2Q96PQ0 1159 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR2M2Q96R28 347 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NPAS1Q99742 590 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 KCNH6Q9H252 994 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ACSS3Q9H6R3 686 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UGT1A7Q9HAW7 530 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UGT1A10Q9HAW8 530 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 UGT1A8Q9HAW9 530 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ADAMTS6Q9UKP5 1117 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZNF256Q9Y2P7 627 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 MAGI2Q86UL8 1455 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 NFASCO94856 1347 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 CD300LBA8K4G0 201 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 RFXAPO00287 272 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 SLC16A6O15403 523 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 TRUB2O95900 331 aaKnown RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 HOXA13P31271 388 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 ADGRF4Q8IZF3 695 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 OR13C4Q8NGS5 318 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 GPR151Q8TDV0 419 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ANKRD9Q96BM1 317 aaPredicted RBP5.22□□□□□ -1.57
USF3-202ENST00000478658 AKR1E2Q96JD6 320 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PGLYRP2Q96PD5 576 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 PRRT1Q99946 306 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 FUNDC2Q9BWH2 189 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 POFUT1Q9H488 388 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ZCCHC4Q9H5U6 513 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 GJB4Q9NTQ9 266 aa5.22□□□□□ -1.57
USF3-202ENST00000478658 ADCY10Q96PN6 1610 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 ERVK-7P63135 1459 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 F2P00734 622 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 PLA2G16P53816 162 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 MLF1P58340 268 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 ERVFC1-1P60608 527 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 CHRNEQ04844 493 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 PLA2G4EQ3MJ16 856 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 CES4AQ5XG92 561 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 HMGN2P46Q86SG4 172 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 LYSMD2Q8IV50 215 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 INTS12Q96CB8 462 aaKnown RBP5.21□□□□□ -1.57
USF3-202ENST00000478658 ARPC5LQ9BPX5 153 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 OR10A5Q9H207 317 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 OR10A2Q9H208 303 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 DCAF16Q9NXF7 216 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 TAS2R9Q9NYW1 312 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 PITPNC1Q9UKF7 332 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 FBXW2Q9UKT8 454 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 PDE10AQ9Y233 779 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 KLK4Q9Y5K2 254 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 ADGRF5Q8IZF2 1346 aa5.21□□□□□ -1.57
USF3-202ENST00000478658 FXYD6-FXYD2A0A087WZ82 144 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms