RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NADK2Q4G0N4 442 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 GALNT12Q8IXK2 581 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 LGI4Q8N135 537 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 OR8K3Q8NH51 312 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 CLHC1Q8NHS4 586 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 ZNF354BQ96LW1 612 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 WDR55Q9H6Y2 383 aaPredicted RBP24.92■■□□□ 1.58
CCM2-211ENST00000478582 TEKT2Q9UIF3 430 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 ENTPD4Q9Y227 616 aa24.92■■□□□ 1.58
CCM2-211ENST00000478582 DOCK10Q96BY6 2186 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 MYO1GB0I1T2 1018 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 G6PDP11413 515 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 EPHA3P29320 983 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 RPL3P39023 403 aaKnown RBP24.91■■□□□ 1.58
CCM2-211ENST00000478582 C21orf58P58505 322 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 DUSP2Q05923 314 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 MGAT2Q10469 447 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 MAP4K2Q12851 820 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 ZNF267Q14586 743 aaPredicted RBP24.91■■□□□ 1.58
CCM2-211ENST00000478582 PTGR1Q14914 329 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 PRICKLE4Q2TBC4 344 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 FAM180BQ6P0A1 224 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 FAM47EQ6ZV65 393 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 R3HCC1LQ7Z5L2 792 aaKnown RBP24.91■■□□□ 1.58
CCM2-211ENST00000478582 SLC5A8Q8N695 610 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 ZNF321PQ8N8H1 164 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 ACTRT2Q8TDY3 377 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 GFM2Q969S9 779 aaKnown RBP24.91■■□□□ 1.58
CCM2-211ENST00000478582 DEFB126Q9BYW3 111 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 COPS7AQ9UBW8 275 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 ATP6V1HQ9UI12 483 aa24.91■■□□□ 1.58
CCM2-211ENST00000478582 TRBV11-1A0A0K0K1C0 115 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 A8MUI8 341 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 AKAP10O43572 662 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 LRATO95237 230 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 NT5EP21589 574 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 MPIP34949 423 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 FUT7Q11130 342 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 IGFBP7Q16270 282 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 SLC9B1Q4ZJI4 515 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 B3GNTL1Q67FW5 361 aaPredicted RBP24.9■■□□□ 1.58
CCM2-211ENST00000478582 EPGNQ6UW88 154 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 SPATA19Q7Z5L4 167 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 CCDC116Q8IYX3 515 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 FAM9CQ8IZT9 166 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 RBMXL3Q8N7X1 1067 aaKnown RBP24.9■■□□□ 1.58
CCM2-211ENST00000478582 SUN3Q8TAQ9 357 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 TM9SF4Q92544 642 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 CTHRC1Q96CG8 243 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 NPAS2Q99743 824 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 ZBTB20Q9HC78 741 aaPredicted RBP24.9■■□□□ 1.58
CCM2-211ENST00000478582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.9■■□□□ 1.58
CCM2-211ENST00000478582 MAPRE3Q9UPY8 281 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 ERVK-19Q9WJR5 959 aa24.9■■□□□ 1.58
CCM2-211ENST00000478582 GABRR3A8MPY1 467 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 HRKO00198 91 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 CDK2AP1O14519 115 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 EDF1O60869 148 aaKnown RBP24.89■■□□□ 1.58
CCM2-211ENST00000478582 ZFAND5O76080 213 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 CT62P0C5K7 136 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 DDX5P17844 614 aaKnown RBP24.89■■□□□ 1.58
CCM2-211ENST00000478582 PRPS1L1P21108 318 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 S1PR1P21453 382 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 DIO3P55073 304 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 MLLT10P55197 1068 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 CLDN8P56748 225 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 MEP1AQ16819 746 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 ACER2Q5QJU3 275 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 ABHD17BQ5VST6 288 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 HSDL2Q6YN16 418 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 RPS19BP1Q86WX3 136 aaKnown RBP24.89■■□□□ 1.58
CCM2-211ENST00000478582 RIMKLAQ8IXN7 391 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 ZNF675Q8TD23 568 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 PPCDCQ96CD2 204 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 BBS4Q96RK4 519 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 CNPPD1Q9BV87 410 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 CCDC134Q9H6E4 229 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 EPS8L2Q9H6S3 715 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 STMN3Q9NZ72 180 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 MAT2BQ9NZL9 334 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 ZNF639Q9UID6 485 aa24.89■■□□□ 1.58
CCM2-211ENST00000478582 TENM4Q6N022 2769 aa24.89■■□□□ 1.57
CCM2-211ENST00000478582 GOLGA8QA0A0J9YX86 632 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 GOLGA8OA6NCC3 632 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 TTLL8A6PVC2 850 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 TCP11X1B4DZS4 312 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 GOLGA8NF8WBI6 632 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 SCAMP2O15127 329 aaKnown RBP24.88■■□□□ 1.57
CCM2-211ENST00000478582 SOX18P35713 384 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 HPCAL1P37235 193 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 C6orf163Q5TEZ5 329 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 OR7G1Q8NGA0 311 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 CEP70Q8NHQ1 597 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 MIB2Q96AX9 1013 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 RNF32Q9H0A6 362 aa24.88■■□□□ 1.57
CCM2-211ENST00000478582 PRKNO60260 465 aaPredicted RBP24.87■■□□□ 1.57
CCM2-211ENST00000478582 SORBS2O94875 1100 aaKnown RBP24.87■■□□□ 1.57
CCM2-211ENST00000478582 CLPSP04118 112 aa24.87■■□□□ 1.57
CCM2-211ENST00000478582 FRKP42685 505 aaPredicted RBP24.87■■□□□ 1.57
CCM2-211ENST00000478582 SLC37A1P57057 533 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms