RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 EHD3Q9NZN3 535 aa12.8□□□□□ -0.36
SOX2-OT-208ENST00000477928 SEC14L3Q9UDX4 400 aa12.8□□□□□ -0.36
SOX2-OT-208ENST00000477928 NPIPA1Q9UND3 350 aa12.8□□□□□ -0.36
SOX2-OT-208ENST00000477928 CFL2Q9Y281 166 aa12.8□□□□□ -0.36
SOX2-OT-208ENST00000477928 NBPF19A0A087WUL8 3843 aa12.8□□□□□ -0.36
SOX2-OT-208ENST00000477928 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 TRGV8A0A0C4DH27 118 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 PINLYPA6NC86 204 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 OR6B1O95007 311 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 ATP1B1P05026 303 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 PORP16435 677 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 PTGER1P34995 402 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 HK2P52789 917 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 RBPJQ06330 500 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 FUT7Q11130 342 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 PCLAFQ15004 111 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 C3AR1Q16581 482 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 SLC29A4Q7RTT9 530 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 FGD2Q7Z6J4 655 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 SRRM1Q8IYB3 904 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 MMP21Q8N119 569 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 CYP4Z2PQ8N1L4 340 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 C1orf52Q8N6N3 182 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 C17orf47Q8NEP4 570 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 TP53INP1Q96A56 240 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 TEX10Q9NXF1 929 aaPredicted RBP12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 TINAGQ9UJW2 476 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 CES1P1Q9UKY3 287 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 ACTL7BQ9Y614 415 aa12.79□□□□□ -0.36
SOX2-OT-208ENST00000477928 UBFD1O14562 309 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 PGRMC2O15173 223 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 RGS16O15492 202 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 PCDH7O60245 1069 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 ERLIN1O75477 346 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 BCAS2O75934 225 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 SLITRK5O94991 958 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CHEK2O96017 543 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 FGF4P08620 206 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 NEFHP12036 1026 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CPMP14384 443 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 TIA1P31483 386 aaKnown RBP eCLIP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 SOX3P41225 446 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 XKP51811 444 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 PSPHP78330 225 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 ZNF750Q32MQ0 723 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 C3P1Q6ZMU1 363 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 RNF111Q6ZNA4 994 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 MAMDC2Q7Z304 686 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 C10orf107Q8IVU9 208 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 GALNT12Q8IXK2 581 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 KIRREL3Q8IZU9 778 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 TCP10LQ8TDR4 215 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 PKNOX2Q96KN3 472 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 GPR137Q96N19 417 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 RASL10BQ96S79 203 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CCT7Q99832 543 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CXorf21Q9HAI6 301 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 ZNF780BQ9Y6R6 833 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
SOX2-OT-208ENST00000477928 A0A1B0GUH1 482 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 CAPN14A8MX76 684 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 SLC28A1O00337 649 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 AZIN1O14977 448 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 TM9SF1O15321 606 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 RGS14O43566 566 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 TYROBPO43914 113 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 SLC19A2O60779 497 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 MEOX1P50221 254 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 SLC37A1P57057 533 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 ERVK-8P63133 956 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 ZNF763Q0D2J5 394 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 MAP4K2Q12851 820 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 CDSNQ15517 529 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 CEBPEQ15744 281 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 KRT71Q3SY84 523 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 IL20RBQ6UXL0 311 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 LRIG3Q6UXM1 1119 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 RTL4Q6ZR62 310 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 RGS9BPQ6ZS82 235 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 IKBIPQ70UQ0 350 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 TAGAPQ8N103 731 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 C16orf52Q8NHV5 167 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 CCDC120Q96HB5 630 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 FAM111AQ96PZ2 611 aa12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 GATA5Q9BWX5 397 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 STMN4Q9H169 189 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 C12orf65Q9H3J6 166 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-208ENST00000477928 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms