RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PRR35P0CG20 571 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 GADD45AP24522 165 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 NDUFA5Q16718 116 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 LIPKQ5VXJ0 399 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 FAM86B1Q8N7N1 296 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 GAB3Q8WWW8 586 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 TCRBV5S2A0A599 114 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ARAFP10398 606 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 SLC2A2P11168 524 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-220ENST00000477528 IL12BP29460 328 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ARL9Q6T311 187 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 GID4Q8IVV7 300 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 PSD4Q8NDX1 1056 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 TBX21Q9UL17 535 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ORC5O43913 435 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ENTPD6O75354 484 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 POLR2IP36954 125 aaKnown RBP13.9□□□□□ -0.18
HDAC6-220ENST00000477528 DAPP51397 102 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF527Q8NB42 609 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 OR6K6Q8NGW6 343 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 COPS7AQ9UBW8 275 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 SATB2Q9UPW6 733 aa13.9□□□□□ -0.18
HDAC6-220ENST00000477528 FAM78AQ5JUQ0 283 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 TBPL2Q6SJ96 375 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 UBE2J2Q8N2K1 259 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OR13F1Q8NGS4 319 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OR5K2Q8NHB8 316 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 CNDP2Q96KP4 475 aaKnown RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 DSN1Q9H410 356 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 SLC16A6O15403 523 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 TYRP1P17643 537 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OPRL1P41146 370 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OMPP47874 163 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 BMXP51813 675 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 ZNF77Q15935 545 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 CCSMST1Q4G0I0 132 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 FOXB2Q5VYV0 432 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 RNF111Q6ZNA4 994 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 LILRA3Q8N6C8 439 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 CHTF18Q8WVB6 975 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 MUL1Q969V5 352 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 ZNF354BQ96LW1 612 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 CDCA3Q99618 268 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 FAIMQ9NVQ4 179 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 N6AMT1Q9Y5N5 214 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 SLC5A10A0PJK1 596 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 OR52A4PA6NMU1 304 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 FUT4P22083 530 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 PPP5CP53041 499 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 GTF2IRD2BQ6EKJ0 949 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 GTF2IRD2Q86UP8 949 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 NDNFQ8TB73 568 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 FANK1Q8TC84 345 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 SPPL3Q8TCT6 385 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 TIMM29Q9BSF4 260 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 APOOQ9BUR5 198 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 ACTRT3Q9BYD9 372 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 NAA50Q9GZZ1 169 aaKnown RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 UBE2QL1A1L167 161 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 DLGAP1O14490 977 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 B4GALT2O60909 372 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 FURINP09958 794 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 PORP16435 677 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 SLC6A6P31641 620 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 MLLT10P55197 1068 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 EIF4EBP2Q13542 120 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 UAP1L1Q3KQV9 507 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-220ENST00000477528 AASSQ9UDR5 926 aa13.89□□□□□ -0.19
HDAC6-220ENST00000477528 P2RY2P41231 377 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 VSX2P58304 361 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 PIN1Q13526 163 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 IRF4Q15306 451 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 LMNTD1Q8N9Z9 388 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 MCUBQ9NWR8 336 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 PARP14Q460N5 1801 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 CXorf51AA0A1B0GTR3 108 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 M0R3H8 397 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 CDK1P06493 297 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 ACSL1P33121 698 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 CSTF1Q05048 431 aaKnown RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 HNRNPA0Q13151 305 aaKnown RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 RNASE12Q5GAN4 147 aaKnown RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 TSACCQ96A04 125 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 KLHDC7BQ96G42 594 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 ACOT13Q9NPJ3 140 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 ACSS1Q9NUB1 689 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-220ENST00000477528 SLC25A37Q9NYZ2 338 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 ADAM29Q9UKF5 820 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 CLCA3PQ9Y6N3 262 aa13.88□□□□□ -0.19
HDAC6-220ENST00000477528 A0A1B0GVG6 124 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms